Gene Cagg_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0359 
Symbol 
ID7268460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp448825 
End bp449973 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content62% 
IMG OID643565227 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002461741 
Protein GI219847308 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00159142 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGACACG CTCACTTGCA TCCGCACCAC TCAGTCTGGC ACGACGAACC GGAACCTGAT 
TATCCGACCC TAACCGATTC TGTAGCCGTT GATGTCTGTG TGATCGGGTT GGGCGGATCG
GGCTTGACCT GCATCCACGA GCTGCTTGAG CTTGGGGTGC GCGTGGCCGG GATCGATGCG
ACAACGGTTG GTGGTGGGGC TGCCGGGCGC AACGGCGGTT TTTTGCTGGC CGGGCTAGCA
GCGTTTTACC ATGATGCGGT GACCGCCATC GGGCGCGAGC AGGCCGCAGC GATCTACCGG
CTCACGATCG CTGAAATCGA GCGTATGGCC GCCGCAATGC CGGGTGTGGT GCGGCAGGTT
GGTTCGTTAC GCATCGCTGC TTCGGCAGAG GAAATCGCCG ATTGCGCTGC GCAGTTGCAG
GCGATGCGGG CAGATGATTT GCCGGTCGAG CCATACCGCG GCCCAGAAGG TGAGGGGTTG
TTGCTGCCTA CCGATGGCGC GTTTCAACCG CTCCAGCGCT GTCGCTTATT AGCCGAGCAA
GCGCGACGTG GCGGCGCACT GCTCTTCACC CACACACCGG CGCTGGCAAT TGATGACACA
ATAGTACGTT GCCCACAAGG TCAGATCCAC GCACGTCACG TCATTGTGGC CGTCGATGGC
GGTCTCGAAC AACTACTCCC TGAGTTACGT GGCGTAGTCC GTACCACACG TCTGCAAATG
TTGGCAACAG CGCCCGATCC CGAACGAACC ATCCCGCGAC CGGTCTACAC GCGCTGGGGT
TACGATTATT GGCAGCAATT GCCGGATGGA CGCATCGCGC TCGGTGGCTG TCGTGACCGA
TTTGCGGCAG ATGAATGGGA AGCACCGGCA GAACCTTCGG CGCCGGTGCA AGCGGCGCTC
GAACAGATAT TACAGGAGCG GATTGGCAGT CGGACGCCGA TTGAACGGCG TTGGGCCGCC
CGGGTCGCGT TTCACGTCGG GAGTGTCTTG CCGATAGCTC GTCAGGTGCA TTCGCATGTA
TGGGCAATCG GCGCGTACAA CGGCACCGGT AACGTGATCG GTGCGCTCTG CGGGCGGGCG
GCGGCGCGGG CAGCGGTGCG CGGCGATGTG ACGCTGATGC GGTTGTTGGA TGGCACGGCA
AGGGGATAG
 
Protein sequence
MRHAHLHPHH SVWHDEPEPD YPTLTDSVAV DVCVIGLGGS GLTCIHELLE LGVRVAGIDA 
TTVGGGAAGR NGGFLLAGLA AFYHDAVTAI GREQAAAIYR LTIAEIERMA AAMPGVVRQV
GSLRIAASAE EIADCAAQLQ AMRADDLPVE PYRGPEGEGL LLPTDGAFQP LQRCRLLAEQ
ARRGGALLFT HTPALAIDDT IVRCPQGQIH ARHVIVAVDG GLEQLLPELR GVVRTTRLQM
LATAPDPERT IPRPVYTRWG YDYWQQLPDG RIALGGCRDR FAADEWEAPA EPSAPVQAAL
EQILQERIGS RTPIERRWAA RVAFHVGSVL PIARQVHSHV WAIGAYNGTG NVIGALCGRA
AARAAVRGDV TLMRLLDGTA RG