Gene Cagg_0356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0356 
Symbol 
ID7268457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp442460 
End bp443167 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID643565224 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002461738 
Protein GI219847305 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00145185 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000223354 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATGTTCC GGCTGCGGCG CTGTTTTCTC GTGTGTGGTA TAGTAGCGGC TAACAACCGT 
ATTGTTGGCC GGGTGACCGA ACCGCTTATG AGCACGACGC TCCGTGAACG CCGCCGCCAG
ATGCTACGCG ACGAGATCCT CGCCGCGACG CAGCAATTCA TTGCCGAACG CGGGTTTGCC
GCACTGGCAA TGGATGAACT GGCAGCGCGG GTTGGCATCT CGAAACCCAC CCTTTACAAC
CAATTTCCCA CCCGCGAAGA TTTGCTGGCC GCCATGATTG CGCGCCTGAT CCGTGATCTG
TTCGCAGCCG CCGCCGTGGG CGAGCCAACC GACCGCTCAC CACTCGAACA ACTGTGTGAT
CTCTTGCGCG CCAGCATTGT CTTCCAGATC CAACATCACG CTGCGGCCTT TCAGCTTTGG
CTACCGGAAG TGACCGAGTT GCTGGAGAAG CATCCGCATT CGCGCGATGA ACTTTTACAG
GCCCAAGCGC GGGTAATCCG CCTGGCCGAA GCGGCGATTG CCAACGGTGA AGTGGCTGCC
GATTTGCAAC CGGTGGATGT GATCCGCGCC TTCTCGTCGT TGCTCTGTTT TCCGTTTGTG
GGTGGGCGTA ACTTGCCGCC AGCCGATGAT CCAGAAGCGA CGGCAGATCT GGTGGTGCGT
ATCTTCCGGC AAGGCTTGCA ATCACCGCGT GAACAGACGC AGAGCTAA
 
Protein sequence
MMFRLRRCFL VCGIVAANNR IVGRVTEPLM STTLRERRRQ MLRDEILAAT QQFIAERGFA 
ALAMDELAAR VGISKPTLYN QFPTREDLLA AMIARLIRDL FAAAAVGEPT DRSPLEQLCD
LLRASIVFQI QHHAAAFQLW LPEVTELLEK HPHSRDELLQ AQARVIRLAE AAIANGEVAA
DLQPVDVIRA FSSLLCFPFV GGRNLPPADD PEATADLVVR IFRQGLQSPR EQTQS