Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0356 |
Symbol | |
ID | 7268457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 442460 |
End bp | 443167 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643565224 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002461738 |
Protein GI | 219847305 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00145185 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000223354 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATGTTCC GGCTGCGGCG CTGTTTTCTC GTGTGTGGTA TAGTAGCGGC TAACAACCGT ATTGTTGGCC GGGTGACCGA ACCGCTTATG AGCACGACGC TCCGTGAACG CCGCCGCCAG ATGCTACGCG ACGAGATCCT CGCCGCGACG CAGCAATTCA TTGCCGAACG CGGGTTTGCC GCACTGGCAA TGGATGAACT GGCAGCGCGG GTTGGCATCT CGAAACCCAC CCTTTACAAC CAATTTCCCA CCCGCGAAGA TTTGCTGGCC GCCATGATTG CGCGCCTGAT CCGTGATCTG TTCGCAGCCG CCGCCGTGGG CGAGCCAACC GACCGCTCAC CACTCGAACA ACTGTGTGAT CTCTTGCGCG CCAGCATTGT CTTCCAGATC CAACATCACG CTGCGGCCTT TCAGCTTTGG CTACCGGAAG TGACCGAGTT GCTGGAGAAG CATCCGCATT CGCGCGATGA ACTTTTACAG GCCCAAGCGC GGGTAATCCG CCTGGCCGAA GCGGCGATTG CCAACGGTGA AGTGGCTGCC GATTTGCAAC CGGTGGATGT GATCCGCGCC TTCTCGTCGT TGCTCTGTTT TCCGTTTGTG GGTGGGCGTA ACTTGCCGCC AGCCGATGAT CCAGAAGCGA CGGCAGATCT GGTGGTGCGT ATCTTCCGGC AAGGCTTGCA ATCACCGCGT GAACAGACGC AGAGCTAA
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Protein sequence | MMFRLRRCFL VCGIVAANNR IVGRVTEPLM STTLRERRRQ MLRDEILAAT QQFIAERGFA ALAMDELAAR VGISKPTLYN QFPTREDLLA AMIARLIRDL FAAAAVGEPT DRSPLEQLCD LLRASIVFQI QHHAAAFQLW LPEVTELLEK HPHSRDELLQ AQARVIRLAE AAIANGEVAA DLQPVDVIRA FSSLLCFPFV GGRNLPPADD PEATADLVVR IFRQGLQSPR EQTQS
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