| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0342 |
|---|
| Symbol | |
|---|
| ID | 7268443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 425693 |
|---|
| End bp | 426439 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643565210 |
|---|
| Product | chromosome segregation and condensation protein ScpA |
|---|
| Protein accession | YP_002461724 |
|---|
| Protein GI | 219847291 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1354] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00101989 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00131958 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTATG AGATAACGTT GCCTGCCTTT ACCGGCCCGC TTGATCTGCT CCTGCGCCTG
ATTGAGCGTG CCGAGCTTGA TATTACTGCG ATTGCTCTCG CCAGTGTCGC CGATCAGTAT
CTGGCTCACG TGCGCATGCT TGAGCAGGTT GAGCCGGGAG ATTTGGCCGA GTTTGTCAGT
GTAGCGGCAC GTCTTGTCTT GATTAAGTCA CGAGCGCTTT TGCCACGCTC GCCTGTCGCT
CCGACGGCGC CGGTTGATGA AGATGCCGAA CAGTTGGCGG CACAGCTCGA GTTGTATCGT
CGCTTCAAAC AAGCAGCCGA GGTATTGCGG GTATGGCAGG AGAGCGGACG CAGTACATTT
GTTCGTGTTA CGCCACCATT GTTGCCCCTT GCCCCGTCGC CGGCCACATA CCGTGTCGCC
GATCTGTTGC AAGCGCTGGC CCGTCGCGCG CAGTTGCAGT TGCCGCTCGC AGCGGAAGAA
CGGATCGCGC TGACTCCCCG CTTGACGGTA GCCGAAGTAG TCGGTCGTAT CCGCTCTCGC
CTCGAACGGG TAACGTGGTT TGATTTCAGC GATCTCCTTT CGGTCCAACC AACCGCCGAA
GAGGTGATCG TGTCGTTTTG GGCGGTGCTT GAGTTGTTGA AACGACAGGT CATTGTTGTG
GAACAGACAA CGCTGTTTGG CCCCATTCTT GTCGGGCGTG GCACCGCACC GATTGAGACG
ACAGACGCCG ATGAACGAGA GTTGTAA
|
|---|
| Protein sequence | MSYEITLPAF TGPLDLLLRL IERAELDITA IALASVADQY LAHVRMLEQV EPGDLAEFVS
VAARLVLIKS RALLPRSPVA PTAPVDEDAE QLAAQLELYR RFKQAAEVLR VWQESGRSTF
VRVTPPLLPL APSPATYRVA DLLQALARRA QLQLPLAAEE RIALTPRLTV AEVVGRIRSR
LERVTWFDFS DLLSVQPTAE EVIVSFWAVL ELLKRQVIVV EQTTLFGPIL VGRGTAPIET
TDADEREL
|
|---|
| |