Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0341 |
Symbol | |
ID | 7268442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 423451 |
End bp | 425628 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643565209 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_002461723 |
Protein GI | 219847290 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0143238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0051816 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCGGTA TTTCGTCCGA TCAGATAAAC CGTGCGCTGC CACTCGGCGA TCTGCTCGCT TTCGATGATG CGCTGCGGGC CGACGATACG CCGGAAAGTT TGCTCGGTGA AGTGGTTGAA ACCCTGCGGC GGATTGTCAA TAGCCCGTGT GTTTATGTCC GCCTGCGTGA TACCGAACGC GAGCTGTTGC ACGCGGTCGC GTTTGCCGGG ATTGCACCGG AGTTGGTCGA GCAATTGCGG GCAATACCGA TTGGGCCTGA CGTGTACCAA CCGTTGTTGC GCGATGCGTA TCGCCAGAGT AGTTCGTTTC TCGTGCCTGC CGAGGCATTG CCGGTCGGGG TGCCGGATAC GGCGGCGATT GCCCCGTCGG CGGCGTTGCT GACGCCATTG CGTGGCCGCG GTGACCGTCT GATCGGGGTG ATCGTTATCG CATGGCCTGT ACCACCCGAT CCGGCAACGG TGCGGATGGT TGAAGCGGTT GCCCGGCAAG CAGCTTTGGC GGTTGAGAAT GTGCGATTGG CCGAGCGAAG TGCTCGTTTG CTGGCGAAGG AGCAGTTGCT GGCCGAGTTA GGGCGGGCGG TTGGAGCAAC CCTTGATCTT GACACCATCC TGCGCCAGAC CGTGGATCGC CTGGCCGCGG CTTTCGGTAG TGGGTTGGTA GCCTTACTTG ATGACGAAGG CGAACTCCTC GTTGCCGCCG CAGCATCGCC CTTGACCGAA CTTATCGGTC GGCGCTTGTC TTTGGCCGAT AAAGCGTTGG CGTGGGTTGT GCAAAATGGT CGCCCGTTCG TGATCGAAGA TTGCCGGTCG CCGGAGGGGG CACAATCCAT CTTCCCACCC GACGTGATGT CGTGTGTTAT CGCACCGCTG CGCAGTGGTG GACGAGTCAT CGGTTTACTC AGCGTGGTGA GTCGTCGCGT TGGGGCGTTT AATGATGAAG ATGTCGATCT GCTCGAAGCG ATTGCTGCGC AAGTGAGCGG CCCCATCGTA AGCGCCCAAC TCTACGCCGA GTCACAACGA TTAGCCAGGC AGGTACAACG CCGCGCCGAT CAATTGGCGG TGCTCAATTC GATAGCGCGG ATTGTCACTG CAACGCTCGA TCTCCACGAA TCACTGCCAC TCGCGACACA ACAGATTCAA CAGGGATTTG GCTACCCACA AGTCGATCTC TTTCTGCTCG ATGAAGACGC CAGCGAATTG GTGCTGGTTG CTTCCGCCGG TCAGTACGCG CCGGCCCGGG TTGGTCATCG CCAACATATC AATCTGGGCC TGGTCGGGCG GGCAGCCCGG AGCGGTAAGA TTGTGCGGGC CGAGGACGTT GCCGCCGAGG CCGATTATCT TGGGCTACGT GAGCGGCTCG ATATTCGCTC TGAGCTGTGT GTGCCGCTGA TCGCCAACGG CAAAACCTTA GGAGTACTAA ATATCGAATC CCCACAACCG GCCGGGCTAA CCGCCGAGGA TGCGGCAGTG TTGGAGACGG TAGCCGATAT GTTAGCCGGC GCCGTCGAGA ATGGGCGGCT CTACCAGCGG GCGCAGCAGG CAGCGGCCCT CGAGGAGCGT AACCGACTGG CGCGCGAATT GCACGATAGC GTAAGCCAAC AGCTCTTCAG TATGACCCTC ACTGCCCAAG CCGCCCGTTC CCAATTCGAG CGCAATCCGG CTCGCGTTCC TGTGTTGCTC GAACGCCTGC ACGAGACGGC AACCGCAGCT CTCGCCGAGA TGCGGGCGCT TATCTTTCAA TTACGCCCAC CGGCTCTTCG CGATCAAGGC CTGGTGGCCG CAATTCAACA GCATGCTCAG CATCTTGCGC ATCGAGAAGG GTTGCGCATC GAACTCAACG TGATCGGCGA TGAGCGGCAT GTCCGTGGCA TTGAACAACC GCTCTTCCGT ATTGTGCAAG AGGCTCTGAA CAATATCGTG AAACATGCGG CAGCACGCAA TGTGCGTATC CAGCTCGAAC TCACCGTCGA TCAGGCACGT CTCTGCGTCG CCGATGATGG GCAAGGCTTC GATCCCAAGG CCTATCCCTC CGGTGAGGGT CGTCATCTTG GGTTACTCGG CATGCGGGAA CGTGCCGCCG AACTTGGCGG ATCGTTTACG GTTCGTTCGC ATCCCGGCTC AGGAACAGAG ATCGAGGTGA TCGTTCCCTT GCGCGAGCGT CATGCTGCGG GCGAGTAG
|
Protein sequence | MSGISSDQIN RALPLGDLLA FDDALRADDT PESLLGEVVE TLRRIVNSPC VYVRLRDTER ELLHAVAFAG IAPELVEQLR AIPIGPDVYQ PLLRDAYRQS SSFLVPAEAL PVGVPDTAAI APSAALLTPL RGRGDRLIGV IVIAWPVPPD PATVRMVEAV ARQAALAVEN VRLAERSARL LAKEQLLAEL GRAVGATLDL DTILRQTVDR LAAAFGSGLV ALLDDEGELL VAAAASPLTE LIGRRLSLAD KALAWVVQNG RPFVIEDCRS PEGAQSIFPP DVMSCVIAPL RSGGRVIGLL SVVSRRVGAF NDEDVDLLEA IAAQVSGPIV SAQLYAESQR LARQVQRRAD QLAVLNSIAR IVTATLDLHE SLPLATQQIQ QGFGYPQVDL FLLDEDASEL VLVASAGQYA PARVGHRQHI NLGLVGRAAR SGKIVRAEDV AAEADYLGLR ERLDIRSELC VPLIANGKTL GVLNIESPQP AGLTAEDAAV LETVADMLAG AVENGRLYQR AQQAAALEER NRLARELHDS VSQQLFSMTL TAQAARSQFE RNPARVPVLL ERLHETATAA LAEMRALIFQ LRPPALRDQG LVAAIQQHAQ HLAHREGLRI ELNVIGDERH VRGIEQPLFR IVQEALNNIV KHAAARNVRI QLELTVDQAR LCVADDGQGF DPKAYPSGEG RHLGLLGMRE RAAELGGSFT VRSHPGSGTE IEVIVPLRER HAAGE
|
| |