Gene Cagg_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0335 
Symbol 
ID7268436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp417289 
End bp418038 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content52% 
IMG OID643565203 
ProductABC transporter related 
Protein accessionYP_002461717 
Protein GI219847284 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.739682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0719591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTA ACGGGAATAG TGAACATATC ATCATCTGCG AGAACGTAAA TAAATGGTAC 
GGCGATTTTC ATGCACTGAA GGATGTGAGC TTACGGGTCA AACGCGGTGA AGTTGTTGTA
ATTTGTGGGC CATCAGGTAG CGGTAAGAGT ACCTTCATTC GTACCATTAA TCGGCTTGAA
GAACACCAAG AAGGTCGGAT TATCGTTGAT GGCATCGAAA TGACTAATGA TATTCGCAAT
ATCGATGCTA TTCGTCGGGA AGTAGGTATG GTCTTCCAGC AGTTTAACCT CTTCCCGCAC
CTCACCGTGA TGCAGAATAT TACCCTCGCC CCGATTTGGG TGCGCAAGAA GACCCGCAAA
GAGGCCGAGG CGAAGGCGTT GGAACTGCTC GAACGGGTGG GGATCAAAGA ACAAGCCCAC
AAGTACCCCG GCCAGCTTTC GGGTGGTCAG CAGCAGCGGG TGGCTATTGC GCGCGCATTA
GCGATGGAGC CACGCATTAT GCTGTTTGAT GAACCAACCT CGGCGCTCGA CCCGGAAATG
GTCAAAGAGG TGCTTGATGT CATGAAAACG TTAGCCCGCA GCGGTATGAC GATGCTCTGC
GTTACGCACG AGATGGGGTT TGCCCGCGAA GTGGCCGACC GAATCATCTT CATGGATCAG
GGCCAAATCG TCGAAGAGGG TACGCCTGAC CAGTTCTTTA CGAATCCGCG CAACGATCGC
ACCAAGCTCT TCCTCAGCCA GATTTTGTGA
 
Protein sequence
MSGNGNSEHI IICENVNKWY GDFHALKDVS LRVKRGEVVV ICGPSGSGKS TFIRTINRLE 
EHQEGRIIVD GIEMTNDIRN IDAIRREVGM VFQQFNLFPH LTVMQNITLA PIWVRKKTRK
EAEAKALELL ERVGIKEQAH KYPGQLSGGQ QQRVAIARAL AMEPRIMLFD EPTSALDPEM
VKEVLDVMKT LARSGMTMLC VTHEMGFARE VADRIIFMDQ GQIVEEGTPD QFFTNPRNDR
TKLFLSQIL