Gene Cagg_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0331 
Symbol 
ID7268432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp414173 
End bp414589 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content55% 
IMG OID643565199 
Productprotein of unknown function DUF583 
Protein accessionYP_002461713 
Protein GI219847280 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.198743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGTT CTAATCGCAA ATCCGCCCAA CCGCAACCAG TGGTCAATGG CCGAGCAGAA 
ACCGTGATCG GGGCCAATAC GCGCTTTGTG GGTACCTTGA ATGCCGAAGG GAACGTCCGT
ATCGATGGCG CGGTGGAAGG CGATATCGAG GTCGTCGGTA ATCTGATCAT CGGCGAGACG
GGGCGGGTGA TTGCGACGAT CAAGGCACGG AATGTGCATG TTTCGGGTGC CGTCAAGGGG
CAGATTACCG CGCTTGAACA ACTGGAAATC TCACCCACCG GTAAGGTTTG GGGCGATATT
ACCACTGCGG CACTTCACAT TGAGCCGGGT GGTCTGTTCC GTGGTCAAAG CTCGATGACG
ACCAATATCG AAGAACCACT CCTATTGGAA GCACCCCGTT CATCATCAGA GTCGTGA
 
Protein sequence
MFGSNRKSAQ PQPVVNGRAE TVIGANTRFV GTLNAEGNVR IDGAVEGDIE VVGNLIIGET 
GRVIATIKAR NVHVSGAVKG QITALEQLEI SPTGKVWGDI TTAALHIEPG GLFRGQSSMT
TNIEEPLLLE APRSSSES