Gene Cagg_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0313 
Symbol 
ID7267494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp391951 
End bp392568 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content57% 
IMG OID643565181 
Productcompetence protein ComEA helix-hairpin-helix repeat protein 
Protein accessionYP_002461695 
Protein GI219847262 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0283813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.592381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA ATGGCGAGAC GCCGTGGTAT CGGCGATCAC AACGGCTCTT AGCGGTAGCA 
TGTGCGTTAC TCGGAGGTTT GTTAATCGCG TTTGGCCCTG AAACCCGCGC TGCATGGTTG
GCAACGACCA CTGCCGCGCA GACGACGCCC GAACCATTGT GGGATGAAGT GATACCGACG
CCAACCTCTT CACCACTGGT CGTTTATGTC TCAGGGGCAG TCGTTGCACC GGATGTGTAC
CGCTTACCGC CGGGATCGCG TGTGATCGAT GCGTTGCAAG CTGCCGGAGG CCTTACCGAA
TTGGCCGACA TCGATGGGAT TAATCTCGCC GCGCTCGTGC AAGATAGCCA GCATATTCGC
GTGCCATACG CTGGGGAACG GATGGCGCTG CCGGCGGAGA GTGATCGCAG TCCCGATAAC
GAACTGATTA ATCTGAATCG GGCGACTGCC TCCGATCTAG AGGAGTTGCC GGGTGTTGGG
AAGACGCTCG CCGAACGGAT TATTGCTCGC CGCGAAACCC AAGGGCCGTA CCGCAGTGTT
GATGAGTTGC GTGAAGTAAG TGGGATCGGT GAAAAGCTAT TCAATCAGAT TGCACCGCTT
GTCACAATTG GGCCATAG
 
Protein sequence
MNTNGETPWY RRSQRLLAVA CALLGGLLIA FGPETRAAWL ATTTAAQTTP EPLWDEVIPT 
PTSSPLVVYV SGAVVAPDVY RLPPGSRVID ALQAAGGLTE LADIDGINLA ALVQDSQHIR
VPYAGERMAL PAESDRSPDN ELINLNRATA SDLEELPGVG KTLAERIIAR RETQGPYRSV
DELREVSGIG EKLFNQIAPL VTIGP