Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0313 |
Symbol | |
ID | 7267494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 391951 |
End bp | 392568 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643565181 |
Product | competence protein ComEA helix-hairpin-helix repeat protein |
Protein accession | YP_002461695 |
Protein GI | 219847262 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region [TIGR01259] comEA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0283813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.592381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACGA ATGGCGAGAC GCCGTGGTAT CGGCGATCAC AACGGCTCTT AGCGGTAGCA TGTGCGTTAC TCGGAGGTTT GTTAATCGCG TTTGGCCCTG AAACCCGCGC TGCATGGTTG GCAACGACCA CTGCCGCGCA GACGACGCCC GAACCATTGT GGGATGAAGT GATACCGACG CCAACCTCTT CACCACTGGT CGTTTATGTC TCAGGGGCAG TCGTTGCACC GGATGTGTAC CGCTTACCGC CGGGATCGCG TGTGATCGAT GCGTTGCAAG CTGCCGGAGG CCTTACCGAA TTGGCCGACA TCGATGGGAT TAATCTCGCC GCGCTCGTGC AAGATAGCCA GCATATTCGC GTGCCATACG CTGGGGAACG GATGGCGCTG CCGGCGGAGA GTGATCGCAG TCCCGATAAC GAACTGATTA ATCTGAATCG GGCGACTGCC TCCGATCTAG AGGAGTTGCC GGGTGTTGGG AAGACGCTCG CCGAACGGAT TATTGCTCGC CGCGAAACCC AAGGGCCGTA CCGCAGTGTT GATGAGTTGC GTGAAGTAAG TGGGATCGGT GAAAAGCTAT TCAATCAGAT TGCACCGCTT GTCACAATTG GGCCATAG
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Protein sequence | MNTNGETPWY RRSQRLLAVA CALLGGLLIA FGPETRAAWL ATTTAAQTTP EPLWDEVIPT PTSSPLVVYV SGAVVAPDVY RLPPGSRVID ALQAAGGLTE LADIDGINLA ALVQDSQHIR VPYAGERMAL PAESDRSPDN ELINLNRATA SDLEELPGVG KTLAERIIAR RETQGPYRSV DELREVSGIG EKLFNQIAPL VTIGP
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