Gene Cagg_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0308 
Symbol 
ID7267489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp384777 
End bp385490 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content58% 
IMG OID643565176 
Productribose 5-phosphate isomerase 
Protein accessionYP_002461690 
Protein GI219847257 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCTG TTGAAACGCT GAAAGCAATG GCGGCGGCGG CGGCCGTAGC ACTGATCCAG 
CCGGGTATGG TGATCGGGTT GGGGTTTGGG AGTACGGCCG CGTATGCAAC GCGGATGATC
GGTGAACGCT TGGCAAATGG CGAACTCCGC GAGATCGTCG GTGTACCGTG TGCTGAAGGG
ACCGCAGCAC TGGCCCGCGA GCTGGGTATT CCCCTCACTA CCCTTGATGA TGTAGAGAGG
GTTGATATAA CCATTGATGG CGCCGATGAA GTCGATCCAT ATATGGCCCT GATCAAGGGT
GGTGGTGGTG CATTGCTCCG TGAAAAGATG GTTGCTCAAG CCAGTCGACG GGTCGCGATT
ATCGTTGACG AAAGTAAGCT CTCACCGGCC CTTGGGACGC GCTTCGCATT GCCGATCGAA
GTGGTTGATT TCGGCTACCG AGCAACGGCT CGCTGGTTAG CTGCCCAAGG TGGGAGCGTG
CGCTTGCGCC TTCGCTCTGA TGGGCAACCG TTTCGCACCG ATCAAGGTCA TCTGATCCTC
GATTGGGCAT GTGGCCCGAT TGCCGACCCA ACGGTACTGG CCGACCGCTT AGCTGCACGA
GCCGGTATCG TCGAGCATGG CCTGTTTATC GGCCTGGCAA CCGATTTGTT CGTTGCCGGA
GCAACAGGCG TGCGGCATAT TGTTCGCCCA GATTGCGGTA GAATAGCGCC ATAA
 
Protein sequence
MSSVETLKAM AAAAAVALIQ PGMVIGLGFG STAAYATRMI GERLANGELR EIVGVPCAEG 
TAALARELGI PLTTLDDVER VDITIDGADE VDPYMALIKG GGGALLREKM VAQASRRVAI
IVDESKLSPA LGTRFALPIE VVDFGYRATA RWLAAQGGSV RLRLRSDGQP FRTDQGHLIL
DWACGPIADP TVLADRLAAR AGIVEHGLFI GLATDLFVAG ATGVRHIVRP DCGRIAP