Gene Cagg_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0305 
Symbol 
ID7267486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp382257 
End bp382976 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content54% 
IMG OID643565173 
ProductNUDIX hydrolase 
Protein accessionYP_002461687 
Protein GI219847254 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAG AACGCCCAAC TCGCTCTGAC ATCAGCAAAT ATCCGTTACC GGCAGTAACG 
GTTGATGTAG TGATCTTTAG TTTGATCAAT CGTACCTTGC ACGTGTTACT TGTGCAACGA
AAGCGTTGGC CTTTCGAGGG ACGATGGGCG ATTCCGGGAG GCTTCATTCG GCTCGACGAA
TCGTTGGAGG AAGCGGCGCG CCGCGAACTC GAGGAAGAGA CCGGTGTGCG CGATGTGTAC
CTCGAACAAC TGTATACGTT CGGCGATGTC CAGCGCGATC CGCGCCATCG CGTCATTAGT
GTTGCTTACA TTGCCTTGGT TCGCGCCGAT GCGCAGACGA TCCGGGTCAG CGATGAAAGT
AGTGATGTCC GGTGGTTCCC GGTTGATAAC CTACCAACGC CACTCGCTTT CGATCACGAT
CAGATACTCG CCTATGCCCT CTCACGTTTG CGCTCGAAGC TTGAATACAC GACGCTGGCC
TTTCAACTCC TGCCCGAACT CTTTTCGATC CTCGAATTGA AACATATTTA CGAACAGATT
CTGGGGGAAA AGCTCGATAA AGGGAACTTC TACCGCAAAA TCAAAGAAGC CGGTATCCTT
GAAGAAACAC CGTACATCCG CGAGGGACGT GGCCGACCGA CCCGTCTTTG GCGCTTCCGT
CGTGAACGTG CCGGCGATAA GCAGTTTGTC TTTCGCTGGC GAGAGGATCG ACGCGATTGA
 
Protein sequence
MQEERPTRSD ISKYPLPAVT VDVVIFSLIN RTLHVLLVQR KRWPFEGRWA IPGGFIRLDE 
SLEEAARREL EEETGVRDVY LEQLYTFGDV QRDPRHRVIS VAYIALVRAD AQTIRVSDES
SDVRWFPVDN LPTPLAFDHD QILAYALSRL RSKLEYTTLA FQLLPELFSI LELKHIYEQI
LGEKLDKGNF YRKIKEAGIL EETPYIREGR GRPTRLWRFR RERAGDKQFV FRWREDRRD