Gene Cagg_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0304 
Symbol 
ID7267485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp380826 
End bp381980 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content57% 
IMG OID643565172 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002461686 
Protein GI219847253 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID[TIGR01377] sarcosine oxidase, monomeric form 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATGC TCGAAGTGTT GATTGTCGGC GGCGGGGTGA TGGGTGCGGC TACGGCGTAT 
GCACTCGCCC GGCGCGGTCG GCGGGTGCTG CTCCTCGAAC AATTTGCTCT TGGGCATGCC
CGTGGTAGTT CGCATGGCTT ATCACGTCTG TTTAGTTATG CCTATCCGCA AGCCATCTAT
ACTCAATTGG CGGTGGCGGC TCGCCAAGCC TGGGCTACGC TCGAAGCGGA TGCTCGTCAG
CGTTTGTTGA TCAACACCGG CGCGCTTGAC ATAGCCCAGA CCGATCTCTC CTACATCCGG
TCGTGTGTGA CTCAGTTGAC AGCCGCCGGG GTGCCATTCG AACAACTACC TGCGAATGAA
TTACGATCCC GTTTTCCCGC ACTCGCAGTG ACCGATCAGA CGGTTGGGCT GTATCAGCCC
GATGGTGGTA TCTTGCCGGC TTCACGTTGT GTCGCGACGC TGATCGAGCA GGCCCGTCGT
TATGGTGCCG TCGTTGCAAC CGGTGTGCGT GTTGATCGGT TGTTACCAGA TGGCTCCGGG
GTGCGGGTTG ATGCTGCCGG TGCGACGTAC CGCGCACAGC GTGTCGTGAT TACTGCGGGA
TCGTATACAC CGGTTCTTTT GCGTCAATTA GGATTATCGT TTCCGTTGTT GATCACACGC
GAGCAGTCGG TGTTCTTTTT GCCCCGCCAT CGGGTGCTGA GCAAGATCGG GTATCTACCT
GTGGTGCGGG ATCATGGTCA TGGCAACGGT GAGCCGTTGT TGGTGTGTTA CCCCGATATG
GGAGAGGGAG TTAAAGCAGA GCTAGTTGGT ACCGGCGTTG TTGTTCGTGA TCCGTATGTG
CCGCCGCCAC TGCCCGATCC GGTTGAGAGT GAACGGATCG CTCGGCGACT TGAAGCTACG
TTACCCGGTT TTGCAACACG TCTGTTGCGC GCGGAAACCT GCCGGATGAC CCACACACCG
ACCGGTGATT TTCTGATCGA CCGTCATCCT GAGTACAGCC AAATTGTCTT GGCGGTGCCG
TGCTCCGGTC ATGGTTTTAC GTTTGCGCCG TTGATCGGTG AGATTCTTGC CGATCTTGCA
GTGCAAGGTA CGACCCAGCA CGATATTACG CCGTTCCGGC TCGGACACTT ACGAACATCA
CGTGTATTGA CATAA
 
Protein sequence
MRMLEVLIVG GGVMGAATAY ALARRGRRVL LLEQFALGHA RGSSHGLSRL FSYAYPQAIY 
TQLAVAARQA WATLEADARQ RLLINTGALD IAQTDLSYIR SCVTQLTAAG VPFEQLPANE
LRSRFPALAV TDQTVGLYQP DGGILPASRC VATLIEQARR YGAVVATGVR VDRLLPDGSG
VRVDAAGATY RAQRVVITAG SYTPVLLRQL GLSFPLLITR EQSVFFLPRH RVLSKIGYLP
VVRDHGHGNG EPLLVCYPDM GEGVKAELVG TGVVVRDPYV PPPLPDPVES ERIARRLEAT
LPGFATRLLR AETCRMTHTP TGDFLIDRHP EYSQIVLAVP CSGHGFTFAP LIGEILADLA
VQGTTQHDIT PFRLGHLRTS RVLT