Gene Cagg_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0301 
Symbol 
ID7267482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp378969 
End bp380024 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content57% 
IMG OID643565169 
Productbeta-lactamase 
Protein accessionYP_002461683 
Protein GI219847250 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTG CTATCAATAC GCTTATCACG ACCGCCATCG CCAAACGCAT CTTTCCCGGG 
GCAGTGGTAC TGGTCACTCA ACGTGGTCGT GTGATCCACG CTGTGGCTTA TGGAACGACA
ATGTACGATG ATCCCGGCAC GCAAACGGTA ACGCTCGACA CCATCTATGA TTTAGCCTCG
CTTACCAAAA TATTCACTGC GATAGCGGCA TTACGTCTGC ACGACGCCGG AATGTTGCCG
CTTGATCTAC CGGCTCGCTT CTGGTTACCG GAACTGGCGA ATGACGCGAT CACCGTGCGC
CATCTGCTTA GTCACCGGAG TGGATTAGCC GTACAATTAG CGCCACTGGC CCGCGCCGGT
GCGCATGCGA TCAGACATGC TGTCTATGCA GCGCCCGCAG TACATCAACC TGGCAGTGTC
ACCGAATATG CCAATCTCAA CACCTTTCTC CTCGGCGAGG TTGTCGCCAC GGTCTACGGT
GGTCCACTTG AGGCGGCAAT TGATGAGCTA GTTTGTGCGC CTCTTGGGAT GCAATACACG
CGCTTTTGCC CACCACCCGA ATGGCGCGGA CGGATTGCGC CGACGGAATG GGATTGGGAA
TGGCGTGGGG GATTGGTGCA TGGAGTCGTA CACGATGAAA GCGCGTATGC ATTGGGAGGA
ATCGCCGGGC ATGCAGGTAT GTTTGGCGTT GCTACCGATG TCGTGCGACT GATCGAATTA
TGGTTATGTG AAGGTGCGTG GGAGGGGGTG CAGCTCTTAC GTACCGAAAC GGTGCTCGCT
GCTCGTACAC CACAATCTCC GATTGACAAC CAGAAGGTTA GTGGACTGGG TTGGATGCTA
CGACGACCGT ACATGGGGCC GGCAGGAGCG ATTGCGTTCG GACACAGCGG GTTTACCGGT
CCGATAATGA TCGGCATTCC TACCGCAGAC ATTGCGGTTG TTGTCCTTTG TAACCGCACG
TATCCGCAGC GGACACCGCC ACCCCCGCGG CATATTCCGG TGATCGCCGA GGTGGTGCAT
GCAGTCGTTA CGACGACCGG CTGCGCGATA GAATGA
 
Protein sequence
MIPAINTLIT TAIAKRIFPG AVVLVTQRGR VIHAVAYGTT MYDDPGTQTV TLDTIYDLAS 
LTKIFTAIAA LRLHDAGMLP LDLPARFWLP ELANDAITVR HLLSHRSGLA VQLAPLARAG
AHAIRHAVYA APAVHQPGSV TEYANLNTFL LGEVVATVYG GPLEAAIDEL VCAPLGMQYT
RFCPPPEWRG RIAPTEWDWE WRGGLVHGVV HDESAYALGG IAGHAGMFGV ATDVVRLIEL
WLCEGAWEGV QLLRTETVLA ARTPQSPIDN QKVSGLGWML RRPYMGPAGA IAFGHSGFTG
PIMIGIPTAD IAVVVLCNRT YPQRTPPPPR HIPVIAEVVH AVVTTTGCAI E