Gene Cagg_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0296 
Symbol 
ID7267477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp370999 
End bp372354 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content60% 
IMG OID643565164 
ProductSAF domain protein 
Protein accessionYP_002461678 
Protein GI219847245 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4091] Predicted homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATC TCCTCTCGCT GTTGGCACGT CGGGTTGCCG AGGGCCGCCC GTTGCGGGTT 
GGCTTGATCG GCGCCGGTAA ATTTGGGACG ATGTTTTTGG CGCAGGCGCG TCGGGTGGCC
GGGTTACACG TGTTGGGTGT AGCCGATTTG TCACCGGAGC GGGCTCGGAT GGCGTTGGCC
CGTGCCGGAT GGCCGGAGGC GCAGTATGCG GCGGCCTCAC TCAGCGATGC GCGTGATCAT
GGTACAACCT ATGTAGGTGA TGACGCAGCG GCGCTTATCG CTGCCGATGG TCTTGATGTG
GTCGTTGAAG CAACCGGTGT ACCGGCAGCG GGTGTGTCGC ACTGTCTGCT GGCTATCGAG
CACGGGCGGC ACATTGTGAT GGTAAATGTC GAAGCCGATG CACTGCTTGG CCCGCTCCTC
GCCCGTCGTG CCGCCGAAGC CGGTGTCATC TACTCGCTGG CTTACGGCGA TCAGCCGGCG
CTTATCGCTG AATGTGTCGA GTGGGCACGC GCTTGTGGGT TTGAGGTGGT CTGCGCCGGA
AAAGGGACAC GCTATTTGCC GCATTACCAT CAGAGTACGC CGGATACCGT CTGGCAGTAC
TACGGATTGA GCGCCGAACA GGCTGCGGCC GGTGGTATGA ATCCTCAGAT GTTCAACTCA
TTCCTCGATG GTACCAAGTC GGCGATTGAG ATGGCTGCGG TTGCCAACGC TTGCCATTTG
CGCCCGCAAC CGCACGGCCT CGGCTTTCCA CCGTGTGGTG TCGATGATCT ACCCCATGTG
CTGCGTCCAC GTACTGCCGG TGGGCAACTG ACCCACACCG GCACCGTCGA AGTGGTTTCA
TCGCTCGAAC GCGATGGGCG CCCGGTTTTT CGCGATCTGC GCTGGGGTGT TTACGTCGTG
TTTGCTGCCC CCAACGACTA TGTGCGCCGA TGTTTTGCAG AATACGGTCT CGTGACCGAT
GCCAGTGGCG TCTATAGTGC ATTGTATCGG CCCTACCATC TGATCGGTCT CGAATTGCCG
ATCTCGGTCT TGCGTGTAGG GCTGCGTCAG GAGCCGACCG GTTACCCACA GGCATTTCTC
GGTGATGTGG TGGCAGTTAC CAAACGCGAT CTGGCTGAAG GTGAGGTGCT CGATGGTGAA
GGCGGCTACA CGGTGTACGG CAAACTGATG CCGGCGGTGG ATTCGGTGGC TGCGGGTGCG
TTACCGATAG GCCTCGCGCA CGGGCTTCGT ACCCTGCGCC CAATTGCTGC CGGGACAATT
GTTCGCTGGG AGGATGTGGC CTACGAAACG AACCATCCGG TCGTTCGTTT ACGGCGTTTC
ATGGAACGGA CGATGACACC AGAGGCAACC CTATGA
 
Protein sequence
MNDLLSLLAR RVAEGRPLRV GLIGAGKFGT MFLAQARRVA GLHVLGVADL SPERARMALA 
RAGWPEAQYA AASLSDARDH GTTYVGDDAA ALIAADGLDV VVEATGVPAA GVSHCLLAIE
HGRHIVMVNV EADALLGPLL ARRAAEAGVI YSLAYGDQPA LIAECVEWAR ACGFEVVCAG
KGTRYLPHYH QSTPDTVWQY YGLSAEQAAA GGMNPQMFNS FLDGTKSAIE MAAVANACHL
RPQPHGLGFP PCGVDDLPHV LRPRTAGGQL THTGTVEVVS SLERDGRPVF RDLRWGVYVV
FAAPNDYVRR CFAEYGLVTD ASGVYSALYR PYHLIGLELP ISVLRVGLRQ EPTGYPQAFL
GDVVAVTKRD LAEGEVLDGE GGYTVYGKLM PAVDSVAAGA LPIGLAHGLR TLRPIAAGTI
VRWEDVAYET NHPVVRLRRF MERTMTPEAT L