Gene Cagg_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0289 
Symbol 
ID7267470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp358760 
End bp359902 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content60% 
IMG OID643565158 
Producttransposase, IS605 OrfB family 
Protein accessionYP_002461672 
Protein GI219847239 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGT TTTTCTCCAA GTTACGTCCG ACACTTGCTC AAGTGGCTTG TCTTTCTGAG 
ACGGTGGAAA CCTGCCGCCA ACGCTACAAC CACGCTTTGA GCGAGCGCAA GACTGCCTAT
CGAGAACGTG GCGAGTCCAT CGGCTTTGTG CGCCAATGCG CCAGCCTGCC TATGCTGAAA
CGGGAGGTGC CGCATCTGCA GTGTGTCCAC TCCCAAGTGG TGCAGGATGT CGTGCGTCGA
GGAGACCGCG CGTTTCAAGC GTTCGTTCGG CGGGTGAACG CCGGTGAAAA AGCGGGGTAT
CCGCGCTGCA AAGGGCGGGG CCGGTACGAT AGCTTCACCT ATCCCCGGTG GGGCAACGGC
GTCAAGCGGG AGCAGGGACG GCTCGTCCTC TCCAAAATCG GTGCTATTCG CCTGCACAAC
GATCGCCCGG TTGAGGGCAC GCCAAACATC TGTATCATCG TTCGCAACGC GGATGGATGG
TACGCACACA TCGTGTGTGC TGTTGCACCA TCACCACTCC CGCCACCTGG CAGGTCGGTA
GGGATTGATG TTGGACGTGA GTCGTTTGCA ACGCTGTCGA ACGGCGTGCA GATTGCCAAC
CCGCGCTCCT ATCGCGCCGC CGAACGCACG CTGAAACAGG CACAACGACG GCTCGCTCGT
CGCGTGAAGG GCAGCAATCG CTCCCGTAAG GCTCGCACGT TGCTTGCGAA CGCTCACCTG
AAGGTCAAGC GGGCGCGACG GGATTTCGCC CACACAATCG CCCGCGCACC GGTCAATGAG
GATGACCATA TTGCGGTTGA AAAACTGAAC ATTCGGGGGA TGGTACGGAA CCATCCCCTT
GCCAAATCGA TCTCAGACGC CGGATGGGGT ATCGTTCTGA ATATCCTGCT CGCCAAGGCT
GCACGTGCTG GGCGAGTCGT GGTGGCAGTC AACCCTGCCG GAACGTCGCA CATATGTGCG
CACTGTGGCG AGTCCGTTCC CAAACGACGT GCCGTTCACT GGCACTCCTG CCCGTATTGT
GGTTGTGAAT TGCACCGCGA TCATAATGCT GCGCTTACTA TCCTAAAGAA GGGCGGGGGC
GCCGCCTTCG GGGAGGCTTT GCCGTTGGGC GGGCCGCAGA ACCGAGAACC CCACAGGCTT
TAG
 
Protein sequence
MKTFFSKLRP TLAQVACLSE TVETCRQRYN HALSERKTAY RERGESIGFV RQCASLPMLK 
REVPHLQCVH SQVVQDVVRR GDRAFQAFVR RVNAGEKAGY PRCKGRGRYD SFTYPRWGNG
VKREQGRLVL SKIGAIRLHN DRPVEGTPNI CIIVRNADGW YAHIVCAVAP SPLPPPGRSV
GIDVGRESFA TLSNGVQIAN PRSYRAAERT LKQAQRRLAR RVKGSNRSRK ARTLLANAHL
KVKRARRDFA HTIARAPVNE DDHIAVEKLN IRGMVRNHPL AKSISDAGWG IVLNILLAKA
ARAGRVVVAV NPAGTSHICA HCGESVPKRR AVHWHSCPYC GCELHRDHNA ALTILKKGGG
AAFGEALPLG GPQNREPHRL