Gene Cagg_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0281 
Symbol 
ID7267462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp352593 
End bp353345 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content57% 
IMG OID643565151 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_002461665 
Protein GI219847232 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0874808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.889529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTTG ATCTGAATGG GCGCGTTGCA ATTGTTACCG GTGGTAGCCG CGGCATTGGT 
CGCGCAATCG CCGAGCGGTT GGCCGCAAGC GGTGCGGCTG TCGTGGTGAA TTATCGCGGT
AACGCTGCTG CCGCCGAGGA AACGGTCACC GCAATTCACG CTGCCGGTGG CAAGGCGGTA
GCCGTACAGG GTGACGTCAG CCAGCCGGCT GATGTCGAAC AGATGGTAAA AACGACCATC
GAACAGTTTG GCCGAATCGA TATTCTGGTG AATAACGCCG GGATTACCCG CGATACGCTC
CTCCTCCGTA TGAAGGAGAG CGATTTCGAT GAGGTTATCG CAACCAATTT ACGCGGTGTC
TTTCTCTGTA CACGCGCAGT GCTGCGCCCG ATGACCAAGC AGCGGTTTGG TCGGATTATC
AATATTACCT CGGTGATCGG TTTGATCGGC AATGCCGGTC AAGCGAACTA CGCGGCGGCA
AAAGCCGGTA TCATCGGTTT CACCAAATCC ACTGCCCGTG AGATGGCAAG CCGTGGGATT
ACGGTAAACG CTATCGCTCC CGGGTTTATC GAAACTGAAA TGACCGCCAC GCTCAGTGAG
GAGACGCGCA AAGCTATTCT GGCAACAATC CCCCTCGGCC GGTTCGGCCA GCCGGCCGAA
GTTGCGGGTT TGGTGTGTTT CTTGGCCTCT GATGCCGGCG CATATATCAG CGGTCAAACG
CTGACGATCG ACGGCGGGAT GGTGATGTCC TGA
 
Protein sequence
MLLDLNGRVA IVTGGSRGIG RAIAERLAAS GAAVVVNYRG NAAAAEETVT AIHAAGGKAV 
AVQGDVSQPA DVEQMVKTTI EQFGRIDILV NNAGITRDTL LLRMKESDFD EVIATNLRGV
FLCTRAVLRP MTKQRFGRII NITSVIGLIG NAGQANYAAA KAGIIGFTKS TAREMASRGI
TVNAIAPGFI ETEMTATLSE ETRKAILATI PLGRFGQPAE VAGLVCFLAS DAGAYISGQT
LTIDGGMVMS