Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0274 |
Symbol | |
ID | 7267455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 345342 |
End bp | 346448 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643565144 |
Product | ABC transporter related |
Protein accession | YP_002461658 |
Protein GI | 219847225 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.533134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCAA TCAAGTACGA TCACGTGTGG AAGCGGTTCG GTGAAGTAAC CGTCCTCAAG AATCTCGACC TTGACATTGC CGACGGGGAG TTTCTCGTAC TGGTCGGACC ATCGGGTTGT GGGAAGTCTA CAGCGTTACG TTGTCTGGCC GGCCTGGAAG AGGTGACCGA AGGCCGTATC TTCATCGGCG ACCGTGATGT CACCGACATT CCACCCAAAG ATCGCGACAT CGCAATGGTA TTCCAGTCAT ACGCTCTCTA CCCACACATG AGCGTGTATG ACAACATGGC ATTTGGTCTC AAGCTGCGCC GCGTCCCAAA GGCAGAAATC GACCGGCGGG TGAAAGAGGC AGCCGAGATG CTCAGTATCG CCCACTTGCT CGACCGCAAG CCGAAAGCAC TATCCGGCGG TCAACGTCAG CGAGTCGCGC TTGGCCGGGC CATTGTGCGC GACCCGGCCG TCTTCTTGAT GGACGAGCCG CTCTCGAACC TTGACGCCAA GCTGCGCGTG CAAACTCGTG CCGAGATCAG CAAGCTCCAC CAACGCCTCA AGACTACCTT CATCTACGTA ACCCACGACC AGACCGAAGC GATGACGATG GGTTCGCGCA TTGCGGTGAT GCGTGATGGG ATTTTGCAGC AGATCGATAC ACCGCAGAAT CTGTACGATC ATCCGGCGAA TATGTTTGTC GCCGGTTTTA TCGGCAGCCC GGCAATGAAC TTCTTCGAGG CACGGCTCGA ACGTACTGAC GGTGGGGTAA GTGTTGTGGT CGGGAAAGAG TTTGTTTTAC CGGTACCACA GAGCAAGCTC GATCACGTGA GTAGTCATAT TGGCAAGACG GTCTATTTCG GTATTCGCCC AGAAGACCTA CACGATGCCC ATTATGTGCC GCGTGGCGTG GACGAGCGGG CGAAGGTGAA AGCATCGGTC AACGTGGTTG AGCCGATGGG GTCTGAAATC TACGCCTACG TTGAGAATAG CGGCAAAGAA TTCATTGGCC GCTTTGATCC GCGCTCAACG GCTCGGACCG GTCATACGAT CGAGGTCGTC TTCGATATGG AGAAGATGCA CATCTTCGAT CGGGAGACTG AAAAGGCGTT GACGTAA
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Protein sequence | MASIKYDHVW KRFGEVTVLK NLDLDIADGE FLVLVGPSGC GKSTALRCLA GLEEVTEGRI FIGDRDVTDI PPKDRDIAMV FQSYALYPHM SVYDNMAFGL KLRRVPKAEI DRRVKEAAEM LSIAHLLDRK PKALSGGQRQ RVALGRAIVR DPAVFLMDEP LSNLDAKLRV QTRAEISKLH QRLKTTFIYV THDQTEAMTM GSRIAVMRDG ILQQIDTPQN LYDHPANMFV AGFIGSPAMN FFEARLERTD GGVSVVVGKE FVLPVPQSKL DHVSSHIGKT VYFGIRPEDL HDAHYVPRGV DERAKVKASV NVVEPMGSEI YAYVENSGKE FIGRFDPRST ARTGHTIEVV FDMEKMHIFD RETEKALT
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