Gene Cagg_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0271 
Symbol 
ID7267451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp342473 
End bp343192 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content60% 
IMG OID643565140 
ProductFHA domain containing protein 
Protein accessionYP_002461655 
Protein GI219847222 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.373949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCATTCT GTCCACAGTG CGGTGCTGCG AATCCTGACA GCGCGCGGTT TTGTGATCAG 
TGCGGTGCAA AGTTGATTCC GGTGCGGGCT CCATCGGCTA CATCAGCACC GTCGGCACCG
CCGGTTACTA CGGCCGGTGG GCCGGTAAGT GTCGGTGCAA CGACATGTCC TCAGTGTGGG
TTTAGTGTCA TTCCGGGCGA GGCGTTCTGC GATAACTGTG GGGCACCGTT GTTCCAGGCA
CCGCCGGTTA CAAGCGTACC GGCACCAGAC GTGCCGCTTC CCGGTGTGCC GCCACAGCCC
ACTTATCCGC CGCCGCAACC GGTGACGATC CAGTCGTCGA CGCCAGCGCC GCCAGTAGCT
ACACCGCCAC CGGCAGCACC CGTTGCGCGA ACCTCGTTGG CCGGGGTGCG GTTATGTCTG
GCAAATGGCA GCATACTGGC GTTACCGGCA GTCACGCAGG CTTTCGTCGG GCGGGCCGAT
CCGGTGAGTA ACTTTTATCC TGATATTGAC CTGACGGCGC ACGGTGGGCT TGAACATGGC
GTAGGTCGTC GCCATGGCCG CTTCTTCGTG CAGCAGGGAC AGGTTTATTA TGAAGATCTC
GACAGTACGA ATGGCAGTTT TCTTGACGGA CGTGCATTGG CGCCGCGTCA GCCGGCACCG
GTACGGCACG GTGATGAATT ACGGTTAGGA ATGCTTAGAC TGGTGATTGA GGTGCAATAA
 
Protein sequence
MPFCPQCGAA NPDSARFCDQ CGAKLIPVRA PSATSAPSAP PVTTAGGPVS VGATTCPQCG 
FSVIPGEAFC DNCGAPLFQA PPVTSVPAPD VPLPGVPPQP TYPPPQPVTI QSSTPAPPVA
TPPPAAPVAR TSLAGVRLCL ANGSILALPA VTQAFVGRAD PVSNFYPDID LTAHGGLEHG
VGRRHGRFFV QQGQVYYEDL DSTNGSFLDG RALAPRQPAP VRHGDELRLG MLRLVIEVQ