Gene Cagg_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0249 
Symbol 
ID7267429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp314779 
End bp316254 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content56% 
IMG OID643565118 
Productglycine dehydrogenase subunit 2 
Protein accessionYP_002461633 
Protein GI219847200 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.494038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAATG AAGAACCACC TATTTTTACC TATTCGCAGC CCGGGAAAAT TGGCGTCAAT 
CTCCCCGATG CTGGAATAGC GTCAACACCT CTTCCCACCG AGCTGCTGCG GCAAGATGAT
CTGGCCGGTT TTCCTGAATT AACCGAGCCG GAAGTTATTC GTCATTTTAC CCGCATCAGT
CAGCGTAACT ACTCGATTGA TACCGGCTTC TACCCGTTGG GATCGTGTAC GATGAAGTAC
AACCCCAAGC TCCACGAAGA GGTTGCTCGT TTACCCGGCT TTGCCGCTGC CCACCCATTG
CAAGATGAGG AACTCAGCCA GGGTGCGCTG CAACTGATGT ATGAGCTGCA AACGTATCTC
GGCGAGATCA GTGGGTTTGA CGCCGTTAGC CTACAACCGG CTGCCGGCGC ACAGGGTGAA
CTCACCGGTA TTCTTGTCTT TCGGGCCTAT CACCTCGACC GCGGCGATAC CGACCGTACT
GAGGTGCTCG TGCCCGATTC GGCGCACGGT ACGAACCCGG CGACGGCGGC AATGGCCGGC
TTGAAGGTGG TCGAGTTGAA GAGCGATGCG CGTGGGAACG TCGATCTCGA CGATCTCAAA
GCGAAGCTAT CGCCACGTAC TGCCGGTATG ATGCTCACCA ACCCCAACAC GCTGGGTCTG
TTTGAAGAGC ATATCGTCGA AATTTGCCGT CTCGTTCACG AAGCCGGTGG TTTAATGTAC
GGCGATGGTG CTAATTTCAA CGCCATTTTA GGTATCGCCA AGCCCGGTGA ATTGGGGTTT
GATTTCATGC ACTACAACCT ACATAAGACC TTCACCACGC CCCATGGTGG TGGCGGCCCC
GGTTCGGGTG CAGTCGGTTG TACTGCTGCC CTCGCCCCCT ACTTGCCCGG TCCGCGCGTC
CGCCAACGGG CAGACGGGAA GTATGAGTTC TTCACCCCCG AAAAGAGCAT CGGGCGGATG
AAAGCGTTCC ACGGCAACTT CGGTATGCTG GTGCGGGCAT GGGCGTACAT TCGCTCGATG
GGTGCTGCCG GCTTGCGGGC GGTAAGTGAA ACGGCAGTAT TGAATGCCAA TTATGTGCGC
GTGATGCTCA AAGACATTTA TCCGCAAGCA GTTGACCGCA TCTGTATGCA CGAAACGGTC
TTGCGTGGGC AGATTGCCGG TGCATCCAAA GATGTGCGCA CGCTCGATAT TGCCAAACGG
CTGATCGACT ACGGCTTCCA TCCACCGACC ATCTACTTCC CTCTGATTGT GCCCGAAGCG
CTGATGATCG AACCGACCGA GACCGAGAGT AAACAAACGC TCGATCGGTT CATCGCTACA
ATGCGCCGGA TAGCCGGCGA AGCAGTCGAG ACACCGGAGG TATTGCACGC AGCACCAACG
AGGGCGCCGG TGCGTCGGCT GGATGAAGTA CGGGCTGCGC GCCAACCTAT CTTGCGCTAC
GATCCGATAG CGATTGCGCG TTTGCAAAGT GAGTAA
 
Protein sequence
MHNEEPPIFT YSQPGKIGVN LPDAGIASTP LPTELLRQDD LAGFPELTEP EVIRHFTRIS 
QRNYSIDTGF YPLGSCTMKY NPKLHEEVAR LPGFAAAHPL QDEELSQGAL QLMYELQTYL
GEISGFDAVS LQPAAGAQGE LTGILVFRAY HLDRGDTDRT EVLVPDSAHG TNPATAAMAG
LKVVELKSDA RGNVDLDDLK AKLSPRTAGM MLTNPNTLGL FEEHIVEICR LVHEAGGLMY
GDGANFNAIL GIAKPGELGF DFMHYNLHKT FTTPHGGGGP GSGAVGCTAA LAPYLPGPRV
RQRADGKYEF FTPEKSIGRM KAFHGNFGML VRAWAYIRSM GAAGLRAVSE TAVLNANYVR
VMLKDIYPQA VDRICMHETV LRGQIAGASK DVRTLDIAKR LIDYGFHPPT IYFPLIVPEA
LMIEPTETES KQTLDRFIAT MRRIAGEAVE TPEVLHAAPT RAPVRRLDEV RAARQPILRY
DPIAIARLQS E