Gene Cagg_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0219 
Symbol 
ID7269133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp273228 
End bp274676 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content59% 
IMG OID643565088 
Productisochorismate synthase 
Protein accessionYP_002461603 
Protein GI219847170 
COG category[H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1169] Isochorismate synthase 
TIGRFAM ID[TIGR00543] isochorismate synthases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0140875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAATC CACTTCTTGG GGTACGGGTA ACGACCGCTA CTCTCCGCGA AGTGCCTCGT 
ATGGAGGCAG CAGCCGAGAT TGCCCGACGC CGTGCGCGCG AATTAGGGCG TCCTGTTTTG
GTCAGTGTGA CAACACAAGT TGGTTTGCGT GATCCACTAG CGTTATTTGC CCGTGGTGCC
GGCGTGACCC ATAACCGTTT TTTTTGGAGT GTGCCGGCAG CCAATTTCGA GATTACCGGT
CTAGGGGCAG CATGGAGCTT TACGCCTCCT CTCTCGACCG ATCGCTTTGC CGCCAGTGCT
GAGGCATGGC GGCAATTGAT GGCTGAAGCG GTGATTGATG CCGACCGTGA TCTACCGGTG
CAAGGACCGC TGGCGGTGGC CGGGTTTCGT TTTGATCCCG ATCATCCGCC GAGCGAGTTG
TGGCGTGATT ATCCCCATGC GCTACTCTTG GTGCCACGCT TGTTGATCGT GCGTCACGGT
GATGTCACTA CCTTAACGGT GAACGGTATG GTCGATGCGC AGAGTTCGAC CCTGGCACTG
GGGGCGGCAG CAGCCCGTCG CTTGCAAGCG CTGATCGGGT TGCCGTGGCG GCCTAACCGA
CCACCGCTGG ATGTGCAAGT TGATGTATCG CTTGATCCTG ACGTGTGGAA GGCAATTGTT
GCCGATGCTG TTACCGATCT GCGTGCCGGT ATGCTCGAGA AGGTGGTGTT GGCCCGTGCC
ATGCGGTTAC GCGGGCCAGA GCCGTTCGAT ACGGCGGCTA CCCTCGATAC GCTGCGTCGT
GATTATCCGC ATACCTTTAT CTTTGCAGTA GCACGCGGTG GACGCACGTT TCTGGGAGCT
TCTCCCGAAC GCTTGGTGTC TCTGCGTAAT GGCGATGTGG CCGCTTCGGC GTTAGCCGGT
TCGGCGCCAC GTGGAAAAAC GCCTGAAGAA GATGCTGCGT TGGCCTCGGC ACTGTTGCAA
AGCGAAAAGG ATCGTGCCGA ACACGCTTTT GTCGTGCAGA TGATACGGGC AGCGCTGACC
GATTACTGCG ATGCGGTCCA AGCACCTGAG CTGCCTACGA TTATGCAGGT GCGGAATGTC
CAACATCTGT TTACGCCGAT CACAGCCCGC ATCCGTCCCG GTTACGATAT CTTCGATCTG
GTGCAACGGC TGCATCCTAC GCCGGCAGTT GGTGGAAAGC CGGGTCCGGC TGCACTGGCT
TGGATCCGCG CCCGTGAACA GCTCGACCGC GGTTGGTATG CTGCACCGGT TGGGTGGGTT
GATGCGCGTG GTGATGGCGA GTTCGCTGTA GCACTACGTT CGGCATTGAT CGGTCGCCGT
GAAGCGACGT TGTTTGCCGG CTGTGGCATT GTGGCCGCTT CTGATCCTGA GCGCGAGTTG
GCCGAGACGC GGATAAAGTT GCGTGCGATG CTGGGCGCAC TCGGTGTTGG TGATGAGATG
ATAGGGTAA
 
Protein sequence
MANPLLGVRV TTATLREVPR MEAAAEIARR RARELGRPVL VSVTTQVGLR DPLALFARGA 
GVTHNRFFWS VPAANFEITG LGAAWSFTPP LSTDRFAASA EAWRQLMAEA VIDADRDLPV
QGPLAVAGFR FDPDHPPSEL WRDYPHALLL VPRLLIVRHG DVTTLTVNGM VDAQSSTLAL
GAAAARRLQA LIGLPWRPNR PPLDVQVDVS LDPDVWKAIV ADAVTDLRAG MLEKVVLARA
MRLRGPEPFD TAATLDTLRR DYPHTFIFAV ARGGRTFLGA SPERLVSLRN GDVAASALAG
SAPRGKTPEE DAALASALLQ SEKDRAEHAF VVQMIRAALT DYCDAVQAPE LPTIMQVRNV
QHLFTPITAR IRPGYDIFDL VQRLHPTPAV GGKPGPAALA WIRAREQLDR GWYAAPVGWV
DARGDGEFAV ALRSALIGRR EATLFAGCGI VAASDPEREL AETRIKLRAM LGALGVGDEM
IG