Gene Cagg_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0210 
Symbol 
ID7269124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp261578 
End bp262363 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content52% 
IMG OID643565079 
ProductSec-independent protein translocase, TatC subunit 
Protein accessionYP_002461594 
Protein GI219847161 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA AACCGGCGCG TACCGACGAA GCCGGCGAGG CTTCGATGAC ATTAATCGAA 
CACTTGATCG AATTGCGCAG CCGCATCATC AAGGCCGGCA TTGGCGTATT GATCGGCATG
GTGGTGGGCT TTATCGCGGT GTGGCCACAA GGTCCGATTA AGCTGATCGA TATTCTGATC
CTCACGTTTG CCCCTGTCAA TGAGCGTTTT GCCCCCATCC AGTCGGTTGG TACGACCGAG
CAGTTTACCA GTTATATGAA AGTGGCCCTG CTTGTCGGCG TTATTCTGGC GATGCCGGTG
ATCGTCTATC AATTGCTGGC TTTCATTATT CCGGGGCTGA CCGCGAGCGA AAAGCGGTTG
ATCTTTCGCG CGTTACCGTT TGTCACCTTC TTTTTCTTGG CCGGGATTGC TTTTGGCTGG
TTCGTCACTA CACCGGTCGC AATCCGATTT TTGATCGGCT TTTCCGACTC TCCCCTGATT
CAAACTCAGC CGACGCTGTC GGATTTCTTA GAGACGGTAT CAATGCTGTT GCTGATCAAC
GGCATCGTTT TTGAACTACC GATCATTATT TATGTACTGG CGTATCTGAA TGTGACGACG
GCCAAACAGT TGGCCGGCTA CCGACGGTAT GCTCTGGTGA TTGTGGTTAT TATTGCAGCG
TTTATTACTC CGACCGGCGA TCCGGTCAAT CTGATACTCT TGGCGTTGCC GATGTATTTG
CTATACGAGG TTGGGATTAT CCTTGCACGC TTCGTCCCGC ATCAAACGCA GACTCGTCGC
GTGTAA
 
Protein sequence
MTTKPARTDE AGEASMTLIE HLIELRSRII KAGIGVLIGM VVGFIAVWPQ GPIKLIDILI 
LTFAPVNERF APIQSVGTTE QFTSYMKVAL LVGVILAMPV IVYQLLAFII PGLTASEKRL
IFRALPFVTF FFLAGIAFGW FVTTPVAIRF LIGFSDSPLI QTQPTLSDFL ETVSMLLLIN
GIVFELPIII YVLAYLNVTT AKQLAGYRRY ALVIVVIIAA FITPTGDPVN LILLALPMYL
LYEVGIILAR FVPHQTQTRR V