| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0201 |
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| Symbol | |
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| ID | 7269115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 251218 |
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| End bp | 252414 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643565070 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_002461585 |
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| Protein GI | 219847152 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.974231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA GCCAGCCCGA GACCGACCGC ACCAGTTCTG CGATCAGCCC CGCCGATGTG
CAGGCCCTGA TCGCGCAGGG ACGGCAACAG GGCTTTGTCA CCTTTGAGGA TATTCAGCGG
CTGGTTCCCA ATCTCGAAGA GTCGGTCGAG CAGATCGACA GTATTTATGC CGCCTTAGCC
GAAGCCGGTG TTCCCGTCCA CGACGGTGAT GAACCGGTTA GTGGGGATGA GTCGCTGACA
CCGTCAGTAA CCGATCTTGA CCTCGACGAT GAGCTGTCAG ACGCACTGCT TAGTGATAGT
GTGCGCCTCT ATTTGCGCGA GATTGGGCAA GTGCCGCTGT TGACCGCCGA ACAAGAGAAG
CAGTTGGCAC AGATGATCGA GCGCGGCCAA GCGGCTGAGC GTAAACTGGC TACGCTGCCG
CCCGACAGCC CTGAAGCAGC AAAGTTGCGT CGGATAAAGG AGCAGGGCGA TGAAGCACGC
CAAAAGATGG CAGCAGCGAA CTTGCGTTTG GTCGTGAGCA TCGCCAAACG TTACCGTGAT
CGTGGTCTGC CGCTGCTCGA CCTGATTCAG GAGGGGAGTC TTGGCCTGCT CCGCGCTATC
GAAAAATTCG ATCACACGAA GGGGTATAAG TTCAGTACCT ATGCGACATG GTGGATCAAG
CAGGCCCTCT CCCGTGCGCT GGCCGACCAG TCACGATTAG TGCGCTTGCC CGTTCATCTC
GGTGAGACGC TCAATCGGAT TCAGTCTGCG CGTCGGCAAC TCACCCAGTC GCTGGGCCGT
GAGCCGACCG ATACTGAGCT GGCGAATCAT CTTGGGATGA GCGAAGAAAA GCTGCGTGAA
CTACGGCGGA CTGCGCAAGA TCCGGTTTCG CTTGCGACAC CGGTCGGTGA AGAGGCTGAT
AGTACGCTCG CCGACTTCAT CCCTGATCCG CACGCGCTCG ATGCTGACGA TGCCGCCGCT
AGCGGTATGT TGCGCCAGCA GATTGCCGCT GCCCTCGACC AGCTCAGTGA GCGTGAACGG
CGGGTGCTTG AGCTGCGCTA CGGTCTTGCC GATGGCCAAC CACGCACACT TGAAGAGGTG
GGCAAAGCAT TTGGGGTGAC ACGCGAACGG GTGCGGCAAA TTGAAGTGAA GGCGCTGCGC
AAGCTGCGCC ATCCCCGCTT AGGGAAGCTG CTGAAGGATT ACCTCGATCA GGCGTAG
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| Protein sequence | MTQSQPETDR TSSAISPADV QALIAQGRQQ GFVTFEDIQR LVPNLEESVE QIDSIYAALA
EAGVPVHDGD EPVSGDESLT PSVTDLDLDD ELSDALLSDS VRLYLREIGQ VPLLTAEQEK
QLAQMIERGQ AAERKLATLP PDSPEAAKLR RIKEQGDEAR QKMAAANLRL VVSIAKRYRD
RGLPLLDLIQ EGSLGLLRAI EKFDHTKGYK FSTYATWWIK QALSRALADQ SRLVRLPVHL
GETLNRIQSA RRQLTQSLGR EPTDTELANH LGMSEEKLRE LRRTAQDPVS LATPVGEEAD
STLADFIPDP HALDADDAAA SGMLRQQIAA ALDQLSERER RVLELRYGLA DGQPRTLEEV
GKAFGVTRER VRQIEVKALR KLRHPRLGKL LKDYLDQA
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