| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0194 |
|---|
| Symbol | |
|---|
| ID | 7269109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 242491 |
|---|
| End bp | 244122 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643565066 |
|---|
| Product | conserved repeat domain protein |
|---|
| Protein accession | YP_002461581 |
|---|
| Protein GI | 219847148 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5640] Secreted trypsin-like serine protease |
|---|
| TIGRFAM ID | [TIGR01451] conserved repeat domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTCTT CCCGGCTCAT TACACCGCTT ATTTTTGTCA TTACCCTCCT CACTCTTTTT
CCGGTTACTG TCTCTTCCCA GCACGATTCA CAACCTGAAA TGAACGTCGT CGGTGGGACG
GAAGTTACGC CGGGTGAGTA TCCGTGGCTC GTTGCCTTGA TCGACGCTGC GATTACCGAT
GAAGCCTTCG CATTTTGCGG TGGTGCGCTC GTTGACGATG GTGGTGACTT TACCACCACA
GAGTGGGTGC TCACTGCTGC ACATTGCTTG GTAGATGCGA CCCCAACACA GATCGAGGTA
TTAGTTGGAC AAATCGATCT CTCGCAGGCA ACTGTGAGCC AGCGCAAGGC GGTTGATGAA
TTGATCATTC ACCCATTCTA CCTTGACGAC AATGCGCTCA TGAACGACAT CGCTTTGGTG
CGTTTGGCTA CGCCGGTTAG CGACATAACG CCGATCAAGA TTGCAACACC TGATGATGCA
GCACGGTTTG CACCAGGCGT GACGGCGCAA ATTGCGGGCT GGGGTAATCG ATCACCACAA
ATTGTTTCAG ATTTTCCGAG TGTTGCACAC AAGGCGGAGG TGTCATTGGT TGATCTAGCA
ACGTGCAATC AACGGTACGA TGATGCACTC AGTTCTATGC ACTTGTGCGC CGGTGCGTAT
CCTGAAGGTG CGGTTGATTC ATGCCAAGGT GATAGTGGTG GCCCGTTGAT GGTGCCCGAC
GGTGCAGGCG GTTTGCTGCA TGCCGGGATA GTGAGTTTTG GTGTTGGTTG CGCATGGCCC
TACTTCCCCG GTGTTTATGC GCGCACCGCC TTTTTCGCCG ATTGGATACA AAGCCAGATC
GATGAAACTG CTCATGTCGA TATTTGGCAA TTGCCGCTCA CCGAAGACGG TATACCGTCA
TACATTTCAA CCTCAGCGCC GAATACCCCA TTTACCTATA CGCTCTTCGT GGTGAACAGT
GGCCTCATCC CACTCACCGA TGTGCAAGTT ACGACGACAT TACCGTCAGG TGCCACACTG
ATAAGCGATA GCATCAGTGG TGGAGGTACG TATTCGGATA GCACAAGGAC AATTACCTGG
TCGCTCGCTA TGCTTGATCC AGGTGAGCTA TTGGAACTGA CCTATCAGGT ACAAGCGCCC
TCAAGCGTCA CATCTGGTAA TTACCAAGTT CAGGCCAATA GTAGTGATGG CCCGGTATTC
AGTACTGGGC GTGATCCGAT CAAGACATGG ATCGATGAAC CACGGTTCAT CATTCAGGCA
TTTTCCGAAC CTTTCGTCGA AGTGGGGACG AACTATCCGG TTGAATTTTA CATACAAAAT
CTGGGTAAGG GTCCCAACGC CGGAGCTTCC GCTCTCGGTC TTGTTGTTGA TCTCCCACCC
GATCTTACGG CCACCGTCAT TGATGACGGT GGCACCCAGA CCGGTAACCA GATACGCTGG
ACAATGACCG AGTTACCGCC CGAAACCCTT GTACGTACCA CTGTGTTCTT TACTGCCGGT
GAGGTTGGTG ATATAACGCG AATCTCTAAC ATCGGTCTCT ACAACGAATC AACGACCATT
CACTACGCTT CGTCAGCAGT GCAAGTTATC GTTGTCCCGG CTGTGCGCTA TCTACCGTTG
ATAAGTCGGT AA
|
|---|
| Protein sequence | MYSSRLITPL IFVITLLTLF PVTVSSQHDS QPEMNVVGGT EVTPGEYPWL VALIDAAITD
EAFAFCGGAL VDDGGDFTTT EWVLTAAHCL VDATPTQIEV LVGQIDLSQA TVSQRKAVDE
LIIHPFYLDD NALMNDIALV RLATPVSDIT PIKIATPDDA ARFAPGVTAQ IAGWGNRSPQ
IVSDFPSVAH KAEVSLVDLA TCNQRYDDAL SSMHLCAGAY PEGAVDSCQG DSGGPLMVPD
GAGGLLHAGI VSFGVGCAWP YFPGVYARTA FFADWIQSQI DETAHVDIWQ LPLTEDGIPS
YISTSAPNTP FTYTLFVVNS GLIPLTDVQV TTTLPSGATL ISDSISGGGT YSDSTRTITW
SLAMLDPGEL LELTYQVQAP SSVTSGNYQV QANSSDGPVF STGRDPIKTW IDEPRFIIQA
FSEPFVEVGT NYPVEFYIQN LGKGPNAGAS ALGLVVDLPP DLTATVIDDG GTQTGNQIRW
TMTELPPETL VRTTVFFTAG EVGDITRISN IGLYNESTTI HYASSAVQVI VVPAVRYLPL
ISR
|
|---|
| |