Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0179 |
Symbol | |
ID | 7269094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 229449 |
End bp | 230528 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643565051 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_002461566 |
Protein GI | 219847133 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000362321 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00135922 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGAAT CTTCTTTCGC AACCCTGTCG GTTGCTCAAG TGCGTCAACT CCAGCGCTTT TTCCTGTGGG TTGTCGGCAT CGTGGGCGCA GTCGCTATTG TCGCCACTGT AACCGCTCTG ATCTGGCAAA CGGCGACCGT GATCGCGCTC ATGATCCTCG ATTGGGTGTT AGTCATAGGT GTGCTGCAAG CCTGGGCCCA AACGCGCAGT GGGCAGGTAC GGGTTGCACT CACAACAGCG TTTGTTGCGA TAGTCGGCTA CGGATTAATC GGAGCTATCG TTGTACCAAG TGTGGCGAAT TTGATGGCCT TTGCTCCGAT TGTCGCGGTT GTGTCAATGT TGCCGTTTCT CAGTGGGGTA ATGCTCAGAC GGTTACTGAT CATTGCGTGG ATTGCCGTCA TTGTCACGCT GTTACTGGGT ACCCAAATCC GTCTGTTGCC CCCTATTCCG GATGTTCTGA CCGTGTCGTT CCAAGTTGTC GGTGTGCTCG CTGTCAGTGC TATCCTCTTG TTACAACTAT GGTTGTTTCA TGAACGCTTG TTCGGTGTGA TCAACCAATT GCGGCTTGTG AATGAGGACC TGCAACGCGA ACGAGCCGGT CTGCAAGAGC GAGTAGCGCA GCGTACCGCC GATCTCGAGC GAGCGCTGGC CGAAGTTGAA CATCAAATGG CCGAACAAGC TCGCCTGCTC TCTGAAAATG AACGTCAACG CGAGTTGATC CGCGGCCTGA GTATGCCGGT GTTACCGGTG AGTAGTGAAA CCTTGGTGAT GCCGCTGGTG GGCGAACTCG ATGAGGGTCG GATCGCGTTG GCGCAATCAA CTGCGTTGCA GGCAATTGAT CAGATGCATG CCCGCCATCT TGTCCTTGAC ATCACCGGAA TGCCGTTTGT TGATACAACG GTGGCCGGTG GTCTGATCCG CTTAGTTCAA GCCGCACATC TCCTCGGTGC GCGGGTGACA CTGGTGGGGG TGCGGCCAGA GGTGGCGCAG ACGATGGTTG CGCTCGGTAT TGATCTTGCC AGCGTTGCGA CGGCTGCCGA TCTGGCGTCG GCCTTGCGTC GTGAGCCGAT CACGAAGTAA
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Protein sequence | MQESSFATLS VAQVRQLQRF FLWVVGIVGA VAIVATVTAL IWQTATVIAL MILDWVLVIG VLQAWAQTRS GQVRVALTTA FVAIVGYGLI GAIVVPSVAN LMAFAPIVAV VSMLPFLSGV MLRRLLIIAW IAVIVTLLLG TQIRLLPPIP DVLTVSFQVV GVLAVSAILL LQLWLFHERL FGVINQLRLV NEDLQRERAG LQERVAQRTA DLERALAEVE HQMAEQARLL SENERQRELI RGLSMPVLPV SSETLVMPLV GELDEGRIAL AQSTALQAID QMHARHLVLD ITGMPFVDTT VAGGLIRLVQ AAHLLGARVT LVGVRPEVAQ TMVALGIDLA SVATAADLAS ALRREPITK
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