| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0175 |
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| Symbol | |
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| ID | 7269090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 224629 |
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| End bp | 226137 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643565047 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002461562 |
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| Protein GI | 219847129 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000293077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000024964 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCCACC AACGCACCGT CTTGATCACA CTCGGTGTGA TGATGAGTTT GTTTATGGCT
TCGATGGAAT CGACGGTCAT TGCAACGGCT ATGCCGAGTA TTGTGCGCGA TCTTGGTGAT
ATTACGGGTT TTAGTTGGGT ATTCGCCATC TATATGCTTA CCTCAACGAC TGCCGGGCCA
ATATTTGGTC GCTTGTCGGA TCTGTTTGGC CGGCGACCGG TCTACCTCAC GGCCATTGCT
ATTTTTAGCC TGGGTTCACT GGGGTGTGGG TTGGCAGCCA CCATGCCTCA ATTGATTATG
GCCCGTGCAT TGCAAGGATT GGGTGCAGGT GGGTTATTGC CGTTGGCATT CATTATCGTG
GGCGACATCT TTACGCTTGA GCAACGGGCG AAGGTCCAGG GTCTCTTTTC GGGAGTATGG
GGGGTCAGCT CGGTGATTGG CCCACTGATC GGTGGGTTTT TGGTCGATCA GATTTCGTGG
CATTGGGTCT TTTGGATCAA TTTACCGCCG GCTGCGATTG CTGCGGCGCT TGTGTGGATA
GCATGGCGCG ATCCGGTTCG GGTGGCCGGC ACACGACCAC CCATTGACTA TGCCGGTGCT
GCATTGCTGA GTGTGGGTGT TGTGTTGTTA TTGCTCGGCC TCAATGAACC GACATCGTTG
CGCGGAATTG CTTTGCTGAG CGCTGCCGCC GCGACGTTAG CACTTTTGGT TATGGTCGAG
CTACGGGCAC CGGCTCCCAT TCTACCGGTG CGTTTACTTC GTGAACGGAT GTTTGCCGTT
GCGTGTCTGC ACGGTATTCT AGCCGGTGGC GTACTGTTCG GTAGTATGAA TTATGTCCCC
CTCTTTGCCC AAGGCGTATT AGGGGCCAGT GCAACCGCAG CCGGCACCAC CCTAACGCCA
ATGATGCTGG GTTGGGTATT CACCAGCATT ATCGGTGGTC GGTTGTTGTT GCGGTTCAGT
TACCGTTCGT TAGTCATATG GGGAATGATC ATCTTCGTCG TTGGCGCACT CATGATGGCT
CGTCTGCGTC CTGAAATGAG CCAACCGGAA TTGGCAGCGG CACTGGGATT GATGGGTATC
GGTATGGGTG CGAGTATTCC CTCGTTCTTG ATTGCCGTGC AAAGTACGGT GGTAAGAAGC
GTTTTGGGGG CGGCAACGGC AAGCTTACAA TTCGCACGTA CAATTGGAGG AACGATCGGT
GTGGCAGCAC TAGGGACGCT GTTAACTAAC CGGTTGGCTA CCGAACTGGC CATGCGTGGT
CTGCAACCTG ATGCCATACC GGTTGATGCC TTGCTCGGCG AAGGAGCAAC AACAGTGGTA
TTGGCCGGCG AGCCGCGCCT GGCACTGGCA GCAGCGCTTG CGACTGTATT TACGGTACCG
TTGATCTTTG CGCTGGCAGC CTTAGCCGTG ACCTTTTTTG CTCCGGCACA CAGCCCTGAT
GATCTTCGTC GCAAACGCGA GTATGCCGAT AGTATGGCTG CAGCACCGCA ACAAGCGGGC
GCTGATTAA
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| Protein sequence | MTHQRTVLIT LGVMMSLFMA SMESTVIATA MPSIVRDLGD ITGFSWVFAI YMLTSTTAGP
IFGRLSDLFG RRPVYLTAIA IFSLGSLGCG LAATMPQLIM ARALQGLGAG GLLPLAFIIV
GDIFTLEQRA KVQGLFSGVW GVSSVIGPLI GGFLVDQISW HWVFWINLPP AAIAAALVWI
AWRDPVRVAG TRPPIDYAGA ALLSVGVVLL LLGLNEPTSL RGIALLSAAA ATLALLVMVE
LRAPAPILPV RLLRERMFAV ACLHGILAGG VLFGSMNYVP LFAQGVLGAS ATAAGTTLTP
MMLGWVFTSI IGGRLLLRFS YRSLVIWGMI IFVVGALMMA RLRPEMSQPE LAAALGLMGI
GMGASIPSFL IAVQSTVVRS VLGAATASLQ FARTIGGTIG VAALGTLLTN RLATELAMRG
LQPDAIPVDA LLGEGATTVV LAGEPRLALA AALATVFTVP LIFALAALAV TFFAPAHSPD
DLRRKREYAD SMAAAPQQAG AD
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