Gene Cagg_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0171 
Symbol 
ID7269086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp222251 
End bp223423 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content57% 
IMG OID643565043 
Productgalactokinase 
Protein accessionYP_002461558 
Protein GI219847125 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0371326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000320404 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGAAT TATCGACGAT TTATGCCGCA TTTGAGCGGT ATTTCGGTAA ACCACCTACC 
CGAATCGCTC GTGCTCCCGG TCGGGTTAAT TTGATCGGCG AACATACCGA CTATAACGAT
GGATTCGTTT TTCCGATGGC GCTCGATCGG GCAACTTATG TTGCTGCTCG TCCACGCGAT
GATCGAATTG TGCGTGTATT TAGCGTTAAA TTCCGTGACG AGGATCAATT CGATCTCGAT
CACATTGTGC GTGATACGCA GCGCCAGTGG GTGAATTACA TCCGGGGAGT GGCTAAAGGA
TTGTTAGCCC GTGATTTGCC CCTGCGTGGG GCCGATCTCT TGATCGATAG TGATGTACCC
TCCGGTAGTG GTCTCTCGTC ATCGGCAGCT CTCGAAGTGG CGGTTGGCTA TACGTTCCAA
CTACTCAACC AGATCAACTT GCTCGGTGAG GAACTGGCGT TGCTCGCGCA AGGTGCTGAA
CATTCATTTG TCGGCGTTAA GTGTGGGATT ATGGACCAGT TGATCGCTGC CCTGGGCGAG
GCCGGTCATG CGCTGTTGAT CGATTGCCGC GACTTAAGCT ATCGTCCGAT ACCAATTCCC
ACCGGTGTGC GGGTTGTCGT GTGCGATAGC GGTGTGCGCC ACCGCCTGGC CGGTTCTGAA
TACAATCAGC GGCGGGCCGG TTGCGAGGAG GCGGTCCGCA TCCTGCGTCC GGCGTTGGGC
AAGATCCAAG CGCTTCGCGA TGTCCGTTCG ACCGATCTCG CCGAGTACGG TCATCTGCTC
CCGCCAGAAC TGCTGCCGCT CGTCCGCCAT GTTGTGAGCG AGAACGAACG CACGTTGGCC
GCTGCCGATG CCCTTGCCGC CGGTGATGTG GTGAAGATGG GACAACTCAT GGTTGAGTCA
CACCAGAGTC TACGCGACGA TTATTGCGTC AGTATCGCCG AACTTGACAC GCTGGTTGAT
CTGGCACTGG CTGCACCGGG GTGTTATGGC AGCCGCATGA CCGGGGGTGG CTTTGGCGGT
AGTACCGTCT CGTTGGTCGA AGCGGAGAAG GTTGATGAGT TCGTCGCGGC GATGATCGCC
GGTTATGCCA TTCGAACCGG ACGTACTCTG CAACCGTTGG TCTGTACGGC GGGCGCCGGT
GTTTCGTGCG TTTACGCGAG TGAGGAGGAA TAG
 
Protein sequence
MFELSTIYAA FERYFGKPPT RIARAPGRVN LIGEHTDYND GFVFPMALDR ATYVAARPRD 
DRIVRVFSVK FRDEDQFDLD HIVRDTQRQW VNYIRGVAKG LLARDLPLRG ADLLIDSDVP
SGSGLSSSAA LEVAVGYTFQ LLNQINLLGE ELALLAQGAE HSFVGVKCGI MDQLIAALGE
AGHALLIDCR DLSYRPIPIP TGVRVVVCDS GVRHRLAGSE YNQRRAGCEE AVRILRPALG
KIQALRDVRS TDLAEYGHLL PPELLPLVRH VVSENERTLA AADALAAGDV VKMGQLMVES
HQSLRDDYCV SIAELDTLVD LALAAPGCYG SRMTGGGFGG STVSLVEAEK VDEFVAAMIA
GYAIRTGRTL QPLVCTAGAG VSCVYASEEE