Gene Cagg_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0170 
Symbol 
ID7269085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp221324 
End bp222247 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content57% 
IMG OID643565042 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002461557 
Protein GI219847124 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.37958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00283274 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGGGTA AGCTGTTAAC GCCCCTCTCA ACGGCAGCCG TTCCCCTGAT CTACGGGATT 
AGCCATCGGA TGCTGTTACG GTTGGGCGCG ACGAGTCACG AACGGCGCTT AGCCGGTATC
CGCGCCCATT ACTATCTGAT GCCGGCACGA GGGAATGGCC AATTGCCGAT CCTTTTGTTA
CACGGTATTG CCGACCGTGC CCAGACATGG GCATTTGTGA TGCCACGCCT CACCGATATT
GGCCCGGTGT ATGCACTCGA TTTGGCCGGT TTTGGTCTGA GTGGCTTTCC TCCCGGTCAG
CGTTACGCTA CGATTGCCCA GCAGGTAGCA CTGGTACAGG CGATGATCCG CGACGTGATC
GGTCGGCCTA CGTTGCTGGT AGGGAATTCG ATGGGCGGAT GGATCGCGGT GCGCGTCGCT
CTGGCTTCGC CTGAATTGGT GGCAGGTATC GTCTTACTTG CGCCGGGCGG AGCGCTCTTG
CGTGGGCGTG AGTCGTGGGA GCCGTTCTTG CAAACTATTG AGTTGCCCGA TAAGCGAGCA
GTTCGCACCG TGTTGCGCCA GATGTACGGG CGACCACCCT TACCATTGTA TTTTGCCGGT
GAAGGGTTGC GGATGATCTT CCGGCGTGAT CCGGTCACTC AGTTTGTGGC CGCAGTTGAT
GAGCGTGATA TGTTGTACCC CGAAGAGCTG CGGTCGTTAC GGGTACCGGT GGCAATGATT
TGGGGCGACG CCGACCACTT TATCCCCCGT GAGTCGCGCG ATTTCTTTTG TACCAATATA
CCGAATGCGC GCGTGTTGAT CTTGCCGAAT TGCGGTCATA TGCCACAACA ACAACGACCA
CGCGAGGTCG CCGCTTTTAT TCATGATGTT GCCCGTGACA TTGCAGGGAC ATCGGTGAAC
ACACCTTCTT CATCTACCCA CTGA
 
Protein sequence
MVGKLLTPLS TAAVPLIYGI SHRMLLRLGA TSHERRLAGI RAHYYLMPAR GNGQLPILLL 
HGIADRAQTW AFVMPRLTDI GPVYALDLAG FGLSGFPPGQ RYATIAQQVA LVQAMIRDVI
GRPTLLVGNS MGGWIAVRVA LASPELVAGI VLLAPGGALL RGRESWEPFL QTIELPDKRA
VRTVLRQMYG RPPLPLYFAG EGLRMIFRRD PVTQFVAAVD ERDMLYPEEL RSLRVPVAMI
WGDADHFIPR ESRDFFCTNI PNARVLILPN CGHMPQQQRP REVAAFIHDV ARDIAGTSVN
TPSSSTH