Gene Cagg_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0163 
Symbol 
ID7269078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp215972 
End bp216934 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content56% 
IMG OID643565035 
Producthypothetical protein 
Protein accessionYP_002461550 
Protein GI219847117 
COG category 
COG ID 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00309358 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCGCC CGTGGCTCTC GTGGTTGCTG CGTTTGATCG GGCCGGCGCT GTTGATCGGG 
TTTCTGGCAA CGAGCGATCT ACGCTTACTC TGGGAGATTC TCCGTTCAGC AGAACTCGCA
CCGATCGTAC TATCGCTGGC GCTCATGCCA CCGTTTGTCA TTTTTAAATC ATGGCGCTGG
ACCCAAATCC TCCGCGCAAT GAACATTTCG CTCGATTTGC CTTCAGCCTG TGCCCTTTAC
ACCGTCGGTC TTTTTTACGG TACGACCACG CCGGGGCAAG CCGGTGATCT GCTCAAAGCG
GTCTATCTGC GGGAACGAGG TTTACCGACG GCGCCGGCCT TGCTCTCGGT GGTGCTTGAT
CGACTGTGCG ACCTGATCAT CATGGCGCTC CTGGGGATGA TCGGCGTCTT TGCCTTAGGC
CAACTGTTGC CGAGCCGTGA ACTCCAACAA CTGATCGTCA TCGCAATGGG TATCGGGTTG
ATCGTTGTGA CAACGCTGCT TACTGCTCGC AAGCCGCGCT CATGGCTCTT AACCGAGGTG
TTGCCGCGCG TAGCGCCTCG CTTACGTACC CGTCTTGACC GTTGGAATGA GCAGATGCAT
AGCCTCACCA TCACGCCTCG GCTGGTCATT GCGGTAAGCG GTGCAACCCT CCTCTCGGTC
GCTTTTACCT TTACCCGCCT GTGGCTGCTC TTTCTCGCCC TCGGTCTTAT GGCTATTCCG
CTGCCGGTGA TCGTCGGCGC ATCGGCGTTG ATTGCCGTGT TGCAAGCCTT ACCCATTTCA
ATTGGTGGGG TGGGCGTGCG TGATCTGATC CTTATCGCGA TCCTTGCTGC TTATGGCTAT
ACCCAAGAGC AAGCGCTTGC TCTTTCGGCT ATTTTCTTAC TGATCAACAT CGAACATTCG
CTGGTCGGTT TCATCGTCTC GTTCTGGTAC CCCCTCGGTC GTAGTGGTAC AATATCCCTA
TGA
 
Protein sequence
MARPWLSWLL RLIGPALLIG FLATSDLRLL WEILRSAELA PIVLSLALMP PFVIFKSWRW 
TQILRAMNIS LDLPSACALY TVGLFYGTTT PGQAGDLLKA VYLRERGLPT APALLSVVLD
RLCDLIIMAL LGMIGVFALG QLLPSRELQQ LIVIAMGIGL IVVTTLLTAR KPRSWLLTEV
LPRVAPRLRT RLDRWNEQMH SLTITPRLVI AVSGATLLSV AFTFTRLWLL FLALGLMAIP
LPVIVGASAL IAVLQALPIS IGGVGVRDLI LIAILAAYGY TQEQALALSA IFLLINIEHS
LVGFIVSFWY PLGRSGTISL