Gene Cagg_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0162 
Symbol 
ID7269077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp215026 
End bp215970 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content57% 
IMG OID643565034 
Productglycosyl transferase family 2 
Protein accessionYP_002461549 
Protein GI219847116 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00320055 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCCTA TGCAAACTAC GCCTCATATG ACGTCGGTCG TAGCCGGCGA CTATCCCTTC 
ACAGTGAGTG TTGTCATTCC GGCTTACAAT GAAGCCCATG GTATCGCCAG AGTTATTGAG
CGTATCCGCA CCTACATCCC TACCGCCGAA ATTATTGTGG TCGATGACTG CTCACAGGAC
GACACGGCAG CCGTCGCGCG AGCGGCCGGT GCTCGCGTTA TCCGTCATCC CGTCAACCGT
GGTAACGGTG CCGCAGTGAA GACCGGCATC CGCCGTGCTC ATGGTGAGGT GGTGTTGCTG
ATGGATGCCG ATGGGCAGAT GGATCCGCGC TACATTCCAG ACCTCCTCAG CGGGATCGCT
GCCGGTTACG ATATGGTTGT CGGCGCGCGC ACCCGCGACA CCCAGGGCGA CTCCATCTTC
CGTCGTTTGG GGAACCGGGC GCTTGACGCT CTCGGGAGCT ATCTGGTTGA GACCGAGGTA
CGTGATCTCA CCAGTGGGTA TCGGGCCATC CGCCGTGAGG TGATCATGGA GTTTATCAAT
TTGCTCCCCA ACCGTTACTC ATACCCAACA ACCAGCACGC TCGCTTTGCT CAAGGCCGGT
TACCACGTCG GTTATGTCCC GGTGATGGGT CAGCGACGGC AGGGTGGGCA AAGCGGACAA
AAGTTGCTGC GCAATGGCAT TCGTTTTGGT TTGATCATTC TTCGGATCGT TTCGCTCTTC
GCACCCTTGC GCATCTACCT GCCGGTAGCC CTTGTGATGC AGGTCTTGGC GCTCATCTCC
TTTCTCATCA GTTTCTTTCT CACCGATCCC TTCCGCTTCC ATATCCCGAA TTCAGCAGTC
GGGTTATTTG TCGGCAGTAT TATCATCTTC ATGTTCGGAC TAAATGCCGA ACAAGTAGCG
GCGTTGCGCT TCCAACGTCC GCCGCACGTG CAACAAGAGG ACTAG
 
Protein sequence
MQPMQTTPHM TSVVAGDYPF TVSVVIPAYN EAHGIARVIE RIRTYIPTAE IIVVDDCSQD 
DTAAVARAAG ARVIRHPVNR GNGAAVKTGI RRAHGEVVLL MDADGQMDPR YIPDLLSGIA
AGYDMVVGAR TRDTQGDSIF RRLGNRALDA LGSYLVETEV RDLTSGYRAI RREVIMEFIN
LLPNRYSYPT TSTLALLKAG YHVGYVPVMG QRRQGGQSGQ KLLRNGIRFG LIILRIVSLF
APLRIYLPVA LVMQVLALIS FLISFFLTDP FRFHIPNSAV GLFVGSIIIF MFGLNAEQVA
ALRFQRPPHV QQED