Gene Cagg_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0160 
Symbol 
ID7269075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp210577 
End bp212745 
Gene Length2169 bp 
Protein Length722 aa 
Translation table11 
GC content57% 
IMG OID643565032 
Producthypothetical protein 
Protein accessionYP_002461547 
Protein GI219847114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.323521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0311876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGGCT TGATACGACA TACACTGAAC CATGCGCTGG GGTGGGCTGC GGTAGCAGTG 
CTTATCATTA CCTTGCTCGG CCAGTTGCCG GTGCAGACAC CCTTTGACAT CGGTCGTACC
GATGCTGCGG TGGTGCAGGG GTTTGGTGAA CCGGAAACAG GCGATCCATC GTCTGACGGT
ATGGTTAGAC GAGTGTTGTC GACAGCAGCA CTGCGGATAC CGCATGTTGG CGCACCTGCC
ACGCTCACAA TCCGTTGGAT GGCACCGGCC GGCACGCCGG TGCTGATCAC GGTCAATGAC
GAAGCGCCGA TCCAGCTCCT TGCCCGTGGT GGTTGGGAAG AGCATTCTTT CACGATCACG
AGCGGTTGGC AAAAAGCATT TGATATAGCC GTGAGCATTA CGACGCCAAC GCCTACCGAG
CGTGTTTGGT TAGATCAAGT AACGCTTACC GCAAACCCAC CCCTCTGGCC CTATCCGGCG
CAACTCGGAT ATGCAGCACT CATCGGCGCA TTGATCGGTA GCTTGTTGGC CCGGCGCCCA
CGCTGGCAGA CACTGATTGC CATCGGTGGC TACGGCTTGC TGTGGCTGGT GCTGTACCGC
ATGAGTTCTT ACCCGCTCCT CTATCTCCCG GCGATAACGG TTGTCGCGCT GGGCGCTATC
TGGTTTATCT GGCGTTGGCC CCAATTGGCA ACGTATTGGC CGCAAGCGGC TACCCCACTG
CTGGCAGTCG GAGTGGCCGT TGGCTGGATG ATCTGGCTCA TACCGGCGAT GCAGGCTCAC
GTTACGCTGG CGCGTCCTGG AGTGGAAAAT GACTTTCGCG TCTTTGCTAC TCGTGATACG
GTAGCGACCA TCTTTCAGGC TGATGGTTTC TACAACCTCG GTTATCCGTT ACTCTTGTGG
CTAGTACGAC CACTGACATT CGACAACCCA TTTTTGGCCG GACGGCTGAT CGCGCTGATA
AGTGGTGGGT TATTGATCGG TGGTGCTTAT CTGTTGGCTC GCTGTTTTCT GGCTCCTGCG
CCGGCTCTGC TGGTCACCGT CTTCCTCGCG TGGAGTGGGA TGGTTGTGCA GTATGGTCTG
CTGGTGGGCA GTGATATGCC GTTTGCAGCC GCGTTTACGT TTGCGGTCGC ACTGACGTTG
CACGCCGGAC GTTCTTCGGC GGGATGGATG GCGGTGCTGG CCGGAGTGTT GGCCGGGTTC
GCGTTTCTGA TACGTCACCC CGGTCTGCTA CTTCTCGTGT GGGGAGGCGC TACCCTCTGG
TACCTGAACG GACGACGCGC TGCATTCCTC TTTGTCCTTG GGTTTGGGTT AGCCGCAGCG
CCCCAACTTG TCGTCAACAC CGCGCAAACC GGTCAGCCGT TGTTTAACCA ACAGGCCAAA
AATATCTGGT TGGCGGTGTA CGCTAATACC GACTGGCAGC GATGGGATGA AGTTCCCAAC
AGTATCAGCC TACTTGAGGT TGTTGGGCGT GATCCGATCC GGTTCTTCAC CAACTGGAGC
CGCAATATAG TTGGTTTTCT GGGGGCAGGA GCCGAAGATG TGAGCGAGTT TGGTCGGGCC
GATCAGTTGC GTCTGTTAGG GTGGCCGACC AATTGGCTGG CTATCGGTGG ATTGGTAGTA
GGCGGATGGC TGGCGTGGCA CAAGCGAACC GATCGACATT GGTTGGCATT GTTGGCGCTG
ATCGGTTTGT ACGTTGCCGC GATCAGTGTC GCCTTCATCT TACCACGCTT TTGGCTACCG
TTGGTGCCGC TGTATGCGGT GGCGGCAGCG TGGGCACTTA CCCACTTGCT AAACCGGCCA
CGTTCCTTAT TAGCCGCGGG GTTAGGGTTG ATCGTTTTGC TCTGGCCTGG CCCACAGATG
GCCGTCAGTG CGGTCTTAAC TGCACAACCA CCTGATGAAA CAGGAGCCGT GGCATTGGTG
CAGCAAACGA TAACGACATC CGGGGCGCGC GTGGTTGCCG CCATCCCCGA CCGTCTGCCG
TTGGCGAAAT ATTCAGCGAT TGCCCACCTG ATTACCGAGC GTGTCCCACT AACGGTTACT
TTTGCCGAAT TACAGGCGCT GCATGCCGAT TATGTACTTT GGGATAATGC CCAAGGCGAA
CCACCGTTGC CTACGCCAAA CCAACGCCGA ATCGGTGATG GACGATTTAC CTTGTATCGA
GTACGCTGA
 
Protein sequence
MVGLIRHTLN HALGWAAVAV LIITLLGQLP VQTPFDIGRT DAAVVQGFGE PETGDPSSDG 
MVRRVLSTAA LRIPHVGAPA TLTIRWMAPA GTPVLITVND EAPIQLLARG GWEEHSFTIT
SGWQKAFDIA VSITTPTPTE RVWLDQVTLT ANPPLWPYPA QLGYAALIGA LIGSLLARRP
RWQTLIAIGG YGLLWLVLYR MSSYPLLYLP AITVVALGAI WFIWRWPQLA TYWPQAATPL
LAVGVAVGWM IWLIPAMQAH VTLARPGVEN DFRVFATRDT VATIFQADGF YNLGYPLLLW
LVRPLTFDNP FLAGRLIALI SGGLLIGGAY LLARCFLAPA PALLVTVFLA WSGMVVQYGL
LVGSDMPFAA AFTFAVALTL HAGRSSAGWM AVLAGVLAGF AFLIRHPGLL LLVWGGATLW
YLNGRRAAFL FVLGFGLAAA PQLVVNTAQT GQPLFNQQAK NIWLAVYANT DWQRWDEVPN
SISLLEVVGR DPIRFFTNWS RNIVGFLGAG AEDVSEFGRA DQLRLLGWPT NWLAIGGLVV
GGWLAWHKRT DRHWLALLAL IGLYVAAISV AFILPRFWLP LVPLYAVAAA WALTHLLNRP
RSLLAAGLGL IVLLWPGPQM AVSAVLTAQP PDETGAVALV QQTITTSGAR VVAAIPDRLP
LAKYSAIAHL ITERVPLTVT FAELQALHAD YVLWDNAQGE PPLPTPNQRR IGDGRFTLYR
VR