Gene Cagg_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0157 
Symbol 
ID7266896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp207447 
End bp208085 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content53% 
IMG OID643565029 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_002461544 
Protein GI219847111 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.496465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0812213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCGTT CAGATCAACC ACCTGATGTT GTTATTCGGC GGCTACCCCT CTATGCTCGA 
AGCCTACGCT ACCTACTGGA AGAGGGAATT CATTCCGTCT CATCACAGGA ACTCGGTGAG
CGGATTAATG TGACTGCTGC CCAAATTCGT AAAGACCTTT CGTATTTCGG CGAGTTTGGC
AAACAAGGCA TCGGCTACGA TGTCGAAAAG CTATTGCATC ACATTGAACG GATTCTTGGC
CTCAATCAAC ATTGGCCGGT TGTGCTGGTT GGTATCGGCT TGCTTGGCCA AGCGATTGCC
CGCTACGAAG GCTTTCGTAG CGAGGGGATC GAGATCGTCG CCCTGTTTGA CTCCGATCCG
GCCAAGATCG GGCAGCGAGT TGGTGATTTG GTCATTCAAG ACTTTGCCAA CGTGAGGCGC
GTGGTTGCCG AGAAGCAGGT TAAATTGGCG ATTATCGCGG TTCCTGCGCT TCAGGCACAG
CGGGTCGCCG ATGTGCTGAT CGAGGCCGGT GTGCGCGCGA TCCTAAGCTA TGCACCGATG
ATTTTGCAAG TGCCGGAAGA TGTCTGGGTC CGATATATCG ATCCGGTCGC GGTCTTACAA
AGTATGACCT ACTATCTGGC ACGTGAGCAG CAACATTAA
 
Protein sequence
MERSDQPPDV VIRRLPLYAR SLRYLLEEGI HSVSSQELGE RINVTAAQIR KDLSYFGEFG 
KQGIGYDVEK LLHHIERILG LNQHWPVVLV GIGLLGQAIA RYEGFRSEGI EIVALFDSDP
AKIGQRVGDL VIQDFANVRR VVAEKQVKLA IIAVPALQAQ RVADVLIEAG VRAILSYAPM
ILQVPEDVWV RYIDPVAVLQ SMTYYLAREQ QH