| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0154 |
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| Symbol | |
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| ID | 7266893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 204504 |
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| End bp | 205559 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643565026 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_002461541 |
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| Protein GI | 219847108 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.386223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0859714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC AAATAACCTT CACCGAAATT GCGCAGCTCC CAACAGCGTA CCATGTTGCG
TACATCAAAA TAGAACCGAA TATCGTTCTG GCCCCGATGG CCGGCGTCAC CGACAGCATC
TTCCGCCGCA TGATATTGCG GTTGGGTGGG TGTGGTTTGG TGAGTACAGA GATGACCAAC
GCTGCGAGCG TCAGTCCAAA AGCATTGCGC CGCCATCGCT TGCTCGACTA CCTACCAGAA
GAACGACCGT TGACGATGCA GATTTCGGGC AACGATCCCG ATCTCGTAGC GAATGCAGCA
CGGGTCGTCG AGCAATTAGG GGCCGATATT ATCGATATTA ACTGCGGTTG TCCGTCCCCG
AAAGTCACCG GTGGCGGGCA TGGTTCGGCG TTGCTGCGTG ATCTGCCGAA GATGGAACGA
CTCTTGCGAG CAGTGCGGGC TGCCGTCCAG ATTCCGGTGA CGCTCAAGCT GCGTGCCGGC
TGGGACGAAG CGAGCCTCAA TTTTATTGAA GCCGGCCAGC GCGCCGAAGC TGCCGGCGTC
GCTGCACTAA CGCTACATCC GCGTACCCGT GAGCAAGGGT ACAAAGGGCA AGCCGATTGG
TCACGAGTGG CAGCGCTCAA GCGTGCCGTC TCAATCCCGG TGATCGGGAG TGGTGATGTC
GTCACCGCGC AAGATGCGCT CATCCGATTA CGCGATAGTG GCGCCGATGG CGTGATGATC
GGACGCGGCG CAATCGCTAA TCCGTGGATT TTCCGCCAAG TCGCCGATCT GCGTCAAGGC
CGCACACCGT TTGAGCCAAC TCCTGCCGAT AAGTACCATC TCTTGCTGGA GTACATGGCG
ATCTACGCCG AAGAATTACC CGAACGGTTG GCGCTCAATA AGATCAAACA ACTGATCGGT
CAGTTTTACA TCGGCTTACC CGGCAGTAAC CATCTGCGTG TCGCCGTTCA TACTTCCACC
AGTCTTGCCG CAGCGCAAGA AGCAATTGAG CGATTCTTCG CACCGTATCT CGAAACAGAT
GCAGCGGTGC CTGAACCGGC AATTGCCGCC GATTAG
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| Protein sequence | MSDQITFTEI AQLPTAYHVA YIKIEPNIVL APMAGVTDSI FRRMILRLGG CGLVSTEMTN
AASVSPKALR RHRLLDYLPE ERPLTMQISG NDPDLVANAA RVVEQLGADI IDINCGCPSP
KVTGGGHGSA LLRDLPKMER LLRAVRAAVQ IPVTLKLRAG WDEASLNFIE AGQRAEAAGV
AALTLHPRTR EQGYKGQADW SRVAALKRAV SIPVIGSGDV VTAQDALIRL RDSGADGVMI
GRGAIANPWI FRQVADLRQG RTPFEPTPAD KYHLLLEYMA IYAEELPERL ALNKIKQLIG
QFYIGLPGSN HLRVAVHTST SLAAAQEAIE RFFAPYLETD AAVPEPAIAA D
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