Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0136 |
Symbol | |
ID | 7266875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 184370 |
End bp | 185296 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643565008 |
Product | peptidase C60 sortase A and B |
Protein accession | YP_002461523 |
Protein GI | 219847090 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.765085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000446536 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCCGCC TGAACCCACT TAGCGAACGT CTTTGGCATA TCGTCAGTTG GCGACGGGTA CCGGCGCATC GCCGTGGCCG GTGGTTGCTA GGCACCCTTC TGATGCTGTT TGGTATCGGG GTGTTACTAT ATGTCTTGGT GACGACGTTG CAAATCGAGT ACTACCGCTG GGCTGCGCGC GGTGATTCGC CACTCCCTGC ACCACGGGTT ACAACGAGTA GTTTTCGCCC CGCCGATGAG CGGCCTTTGC CGTTATTACC CGAACTATCG CTCACCTCCT CCGTAACCGG TACAACCGAT ACGCTCGACC CATCTGTTGC GCGTACAACG CAAGACGTAC CTACCTCGGC GAGCAGCGCC CTGCCGACGG TCGATAGTGG TCTGCTCATC TCAGAACCGC CTGAACCGGT GCAAGCCGAT TGGGTAGCAA CGGTAGAGCG CTTGGTGATT CCAGCGATTA AAGTGGACTC GAAAGTGATC GAAGTAGGTT GGGAGACCAT CGAAGAGAAT GGTCAACCGA TCTCAGTCTG GCAGGTTGCC GAGTACGCCG TCGGCCAGCA TCGCGGTTCG GCCAATCCCG GCGAGGGTGA GAATATTGTC TTGGCCGGTC ACGTTGGAGG GTACGGTCGC GTCTTCAAAG ACCTCTTCTA TCTCAAACGG GGTGATGAAG TCATCGTATA CAGTCGTGGT CAACCGTACC GCTACCTCGT CAGCGAGCGG ATTGTCGTTG ATGAAGAGGG CGCGCCACCT GAGCAGCGTC TCGCCAATGC CCGTTATATT GCCCCAACCG GCTACGAAGT GGTAACGATG ATCACGTGTT GGCCGCCCAA TGGCCCCGAT AAGTTTAAGC AGCGGGTGAT TGTGCGGGCG TTACCGGTGC AGCCGACGAC TGATAACGGC ACAGCGCTGC CGGACAGCAC GCGCTAG
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Protein sequence | MLRLNPLSER LWHIVSWRRV PAHRRGRWLL GTLLMLFGIG VLLYVLVTTL QIEYYRWAAR GDSPLPAPRV TTSSFRPADE RPLPLLPELS LTSSVTGTTD TLDPSVARTT QDVPTSASSA LPTVDSGLLI SEPPEPVQAD WVATVERLVI PAIKVDSKVI EVGWETIEEN GQPISVWQVA EYAVGQHRGS ANPGEGENIV LAGHVGGYGR VFKDLFYLKR GDEVIVYSRG QPYRYLVSER IVVDEEGAPP EQRLANARYI APTGYEVVTM ITCWPPNGPD KFKQRVIVRA LPVQPTTDNG TALPDSTR
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