Gene Cagg_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0136 
Symbol 
ID7266875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp184370 
End bp185296 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content58% 
IMG OID643565008 
Productpeptidase C60 sortase A and B 
Protein accessionYP_002461523 
Protein GI219847090 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID[TIGR01076] LPXTG-site transpeptidase (sortase) family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.765085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000446536 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCCGCC TGAACCCACT TAGCGAACGT CTTTGGCATA TCGTCAGTTG GCGACGGGTA 
CCGGCGCATC GCCGTGGCCG GTGGTTGCTA GGCACCCTTC TGATGCTGTT TGGTATCGGG
GTGTTACTAT ATGTCTTGGT GACGACGTTG CAAATCGAGT ACTACCGCTG GGCTGCGCGC
GGTGATTCGC CACTCCCTGC ACCACGGGTT ACAACGAGTA GTTTTCGCCC CGCCGATGAG
CGGCCTTTGC CGTTATTACC CGAACTATCG CTCACCTCCT CCGTAACCGG TACAACCGAT
ACGCTCGACC CATCTGTTGC GCGTACAACG CAAGACGTAC CTACCTCGGC GAGCAGCGCC
CTGCCGACGG TCGATAGTGG TCTGCTCATC TCAGAACCGC CTGAACCGGT GCAAGCCGAT
TGGGTAGCAA CGGTAGAGCG CTTGGTGATT CCAGCGATTA AAGTGGACTC GAAAGTGATC
GAAGTAGGTT GGGAGACCAT CGAAGAGAAT GGTCAACCGA TCTCAGTCTG GCAGGTTGCC
GAGTACGCCG TCGGCCAGCA TCGCGGTTCG GCCAATCCCG GCGAGGGTGA GAATATTGTC
TTGGCCGGTC ACGTTGGAGG GTACGGTCGC GTCTTCAAAG ACCTCTTCTA TCTCAAACGG
GGTGATGAAG TCATCGTATA CAGTCGTGGT CAACCGTACC GCTACCTCGT CAGCGAGCGG
ATTGTCGTTG ATGAAGAGGG CGCGCCACCT GAGCAGCGTC TCGCCAATGC CCGTTATATT
GCCCCAACCG GCTACGAAGT GGTAACGATG ATCACGTGTT GGCCGCCCAA TGGCCCCGAT
AAGTTTAAGC AGCGGGTGAT TGTGCGGGCG TTACCGGTGC AGCCGACGAC TGATAACGGC
ACAGCGCTGC CGGACAGCAC GCGCTAG
 
Protein sequence
MLRLNPLSER LWHIVSWRRV PAHRRGRWLL GTLLMLFGIG VLLYVLVTTL QIEYYRWAAR 
GDSPLPAPRV TTSSFRPADE RPLPLLPELS LTSSVTGTTD TLDPSVARTT QDVPTSASSA
LPTVDSGLLI SEPPEPVQAD WVATVERLVI PAIKVDSKVI EVGWETIEEN GQPISVWQVA
EYAVGQHRGS ANPGEGENIV LAGHVGGYGR VFKDLFYLKR GDEVIVYSRG QPYRYLVSER
IVVDEEGAPP EQRLANARYI APTGYEVVTM ITCWPPNGPD KFKQRVIVRA LPVQPTTDNG
TALPDSTR