| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0134 |
|---|
| Symbol | |
|---|
| ID | 7266873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 183104 |
|---|
| End bp | 183895 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643565006 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IIA |
|---|
| Protein accession | YP_002461521 |
|---|
| Protein GI | 219847088 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01452] phosphoglycolate/pyridoxal phosphate phosphatase family
[TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00041725 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTCA TTCCTCGTTA CGATGGATAT ATCTTCGACC TTGATGGTAC TATCTATCTC
GGCGACATCC TTCTACCCGG TGTTGCCGAA CTGTTGGCGA CACTCCGCCG TGAGGGGCGG
CGGATCGTCT TTCTCTCGAA TAATCCAACC AAGACACGCC GGCAATACGC CGAGCGTTTG
CGGCGTCTCG GCATTGATGC CGATGAGCAT GAGATTGTCA ATAGCTCGGC GGTGATGGTG
GAATGGTTGC TTGCCAATGC CCCCGGCGCA CCGTTATTTG TCGTCGGTGA GGCACCACTC
ATCGGTGAAC TCGAGGCGGC TGGGTTCCCG TTGAGTGAGC GACCGGGTGA GATTGCTTTT
GTTGTCGCTT CGTTTGATCG CACGTTTACC TATCGTAAAC TCCAGATTGC CTTCGATGCG
ATCCGGGCCG GCGCACGCCT CGTCGCCACC AACCCCGACC GCTTTTGCCC GGTCCCCGGT
GGGGGCGAGC CGGATGCAGC AGCGATCATT GCTGCGATCG AGGCGTGTAC CGATACCCGT
TGCGAGGTGA TCGTCGGTAA ACCATCGCCG ATTATGGCCC GCACGGTAAG TAGGCTGATC
AACCTACCAC CCGAACGGTG TATTATTGTC GGTGATCGGT TAATGACCGA TATTGCAATG
GGGATCACAG CCGGTATGGA TACGGCATTG GTGTTAACCG GGGATAGCCG GCGTGCCGAT
CTTGAGCACT CGTCATACCG GCCAACTTAC GTGCTCGAGC GGATTGATGA ATTGATCCGA
GAAACGTCTT GA
|
|---|
| Protein sequence | MQFIPRYDGY IFDLDGTIYL GDILLPGVAE LLATLRREGR RIVFLSNNPT KTRRQYAERL
RRLGIDADEH EIVNSSAVMV EWLLANAPGA PLFVVGEAPL IGELEAAGFP LSERPGEIAF
VVASFDRTFT YRKLQIAFDA IRAGARLVAT NPDRFCPVPG GGEPDAAAII AAIEACTDTR
CEVIVGKPSP IMARTVSRLI NLPPERCIIV GDRLMTDIAM GITAGMDTAL VLTGDSRRAD
LEHSSYRPTY VLERIDELIR ETS
|
|---|
| |