| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0132 |
|---|
| Symbol | |
|---|
| ID | 7266871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 180894 |
|---|
| End bp | 182498 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643565004 |
|---|
| Product | protein of unknown function DUF87 |
|---|
| Protein accession | YP_002461519 |
|---|
| Protein GI | 219847086 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0970919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000025846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGAC GCCAACGACT CGGTGTAGTC ACCGGTGGTT CGCTCCTCGA TGGCTTAACG
GTGCGGCTCG ATGCCGGTAC TTCGGTTGAG GATGTGCGCG TTGGCAAGTT TGTTGTTGTG
CACGGTCAAC GCTTCACCTT TTTTTCGATG GTGACGGATG TACGACTCGG AGCGGTAACG
CCGAAGGTCA TGCTCGATCC GCCACCGGCT GATGAATTCT TCGCCAATGT GCTGAGTGGG
ACTACTACGT ATGGTGAACT ACGGCTCGAT CTACGGCTGA TGTTGCCGCT CGACGGGAGT
GCCGAGCTAT TACCGGTTAA GACGGTCCCC CACCATTTTG CGCCGCTATT CGAGGCGAAC
GCGGAAGATT TTCAGCATGT CTTTGGGCGC GAAGAGGGGA GTCAGTTTAT GATCGGATCT
CCGCTCGATA TGGATGTGCC GGTTTGTATC GACCTCAATC GGCTGGTCGA GCGCTCGAAC
GGAGTATTCG GGAAGAGTGG TACCGGCAAG AGCTTTCTGA CCCGCCTCTT GGTCTGTGGG
GTTATTCTGA ACGACGTGGC TTCTAATCTT ATATTCGATA TGCACGACGA ATACGGATGG
GCGGCGCGCT CAGAAGGGGC ACATTTCGTT AAAGGATTAC GCCAGCTTTT CGGTAGTAAA
GTGTTGCTGT ATGCGCTGGC CGGTGGAGCG TTTGATCGTA AATTGATCGA TGGGGAGATT
ATGATCGGTT ACGATCAGAT CGAACCTGAA GATGTGTTGT TGCTAAGTGA AGAGTTGAAT
CTCAACCCTA CCGCCGCCGA AACGGCTGAG TTGCTGGTTG ACACCTATGG CACCGACTGG
CTTGCTCAGC TTTGGAAGAT GGATCAAGCC GATCTCAAGA ACTTTGCCGA TGAGAAGAGT
GCGAGCCTCG CCTCGTTGAA CGCGCTCAAG CGTAAGACGT TGCAACTCAA ACGTTTGGGT
TTTGTGCGCG AGCGTGCCGA TCTGTCACCG ATCGATCATC TCATCAATGC CCTCATGACC
GGGCGGCACG TGGTGCTAAG TTTTGGTCGT TACGACGATC CCTTAGCGTA TATGCTGGTC
GCCAATGTCA TAACCCGGCG GATTCATCAA CGCTGGCGCG AACAGACCGA GCGGTATCTT
CATTCAAAAC TTGAATCTGA TCGACCGCGC CCATTGATGA TTACCATCGA AGAAGCTCAC
AAGTTCCTCA ACCCACGCCT TGCCCGTCAG ACCATCTTCG GTACGATTGC ACGCGAGATG
CGCAAATACA GCGTGACGCT ACTGGTCGTT GATCAACGAC CTTCATCGAT TGACAGCGAG
GTGCTGAGTC AGCTTGGTAC CCGAATTACC GCGCTGCTAA GCGATGAACA GGACATCGAT
GCCGTGTTCA CCGGTGTCGG TGGTAGTAAC CGACTACGCA TGGTTCTGGC TAATCTCGAC
ACCCGCCAGC AAGCTCTCGT GCTTGGTCAC GCTGTTCCAA TGCCGGTAGT GGTACGAACA
CGACCCTACG ATGAGACCTT TTATCGCTTC ATCGAGCAAC GCACACGCCG GGCGCGTGAT
ATGGTCACGG CCCAACAAGA GGCCGATGAG CTATTCCCCG ATTAA
|
|---|
| Protein sequence | MQRRQRLGVV TGGSLLDGLT VRLDAGTSVE DVRVGKFVVV HGQRFTFFSM VTDVRLGAVT
PKVMLDPPPA DEFFANVLSG TTTYGELRLD LRLMLPLDGS AELLPVKTVP HHFAPLFEAN
AEDFQHVFGR EEGSQFMIGS PLDMDVPVCI DLNRLVERSN GVFGKSGTGK SFLTRLLVCG
VILNDVASNL IFDMHDEYGW AARSEGAHFV KGLRQLFGSK VLLYALAGGA FDRKLIDGEI
MIGYDQIEPE DVLLLSEELN LNPTAAETAE LLVDTYGTDW LAQLWKMDQA DLKNFADEKS
ASLASLNALK RKTLQLKRLG FVRERADLSP IDHLINALMT GRHVVLSFGR YDDPLAYMLV
ANVITRRIHQ RWREQTERYL HSKLESDRPR PLMITIEEAH KFLNPRLARQ TIFGTIAREM
RKYSVTLLVV DQRPSSIDSE VLSQLGTRIT ALLSDEQDID AVFTGVGGSN RLRMVLANLD
TRQQALVLGH AVPMPVVVRT RPYDETFYRF IEQRTRRARD MVTAQQEADE LFPD
|
|---|
| |