Gene Cagg_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0125 
Symbol 
ID7266863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp172495 
End bp173760 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content54% 
IMG OID643564997 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002461513 
Protein GI219847080 
COG category[R] General function prediction only 
COG ID[COG2270] Permeases of the major facilitator superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000276645 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000206769 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGACAG CCTCAGAAGA GGTGCTTACC CGTTATGCCC GCCGCAATTT CTGGTTGAAC 
GTTCTCGATG GCAGCGCATT TACCTTTGGA ATCAGTCTTG TTTCGCGATT TACCGTCTTA
CCGCTGATCG TTGAGCGCTT AACCGATGCA CGTTGGGTAC AGGGATTGAT CCCGGCGATT
TTTTTTGCCG GATGGTTATT ACCGGGATTA TTGACAGCAC CGCTGATAGC AGCTCAGCCA
CGGCGTAAAC CATGGGTTCT ACTGGCAACC ATAGGTGAAC GGTTGCCATT TTTGATAATG
GGTATTTTGC TGCTGACACT ACCTGATTTA CCGGCGAGTA CATTGCTGAT TATTGTGCTG
AATCTGTATG CAATCTTTGC TACTAGCGCT GGATTGACTT CGATTGCCTG GCAGGATCTG
ATTGCACGAG TGATTCCAGC GCAACGTTGG GGTGTCTTTT TCGGGTTACA AGCCGGTTTA
GGCGGTTTAC TCGGCATCGG TGGTGGTGCG ATAGCGGCAG CGATTCTGGC GCAGCAACCT
TTTCCACAAA GCGCCGGTAT ACTTGCTCTG ATCTGTTTTG GGGCAATGGT AGTGTCATAC
ATCTTTCTTG CGCTTACCGT CGAACCGGCG CAGACACCGG TACCGGCTCG CCCATTTCAT
GTCTTTTTGC GCGGTTTGGG GCCACTCTTG CGAAGCAACG TTGCGTTTCG CCGCTATCTT
TTTTGCCGTG CGGCGATTGC GCTTGGTTTG ACCGGACACA GTTTTCTGAC GGCGGCTGTG
CTCGAACGGT TTCAGTTACC GGCTGCCGAG ATTGGGCTGT TTACCGGTGT AATGTTGGCA
GCGCAGGCAG TAGGCAACAT TGGGTTGGGT GCGTTAGCCG ACCGATGGGG GCATAAGCAG
GTGTTGGCGC TAGCGGCAAC GATGGGCATG GCTGCGCTTA TCTTGGCCCT GTTGGCTCCG
ACCAGTAGCT GGTTCTATTT CATTTTTGCG TTAGTCGGCG CAGCACAGGC TGGGTATCAG
CTCTCCGGCT TTACGCTCGT CTTTGCTTTT AGTCCGCCAG AAGAACGCAC GACCTACATC
GGTGTGGCGA ATCTTGCGTT GGCACCGGTG GCAGCACTTG GCCCAATCGT GGTTGGTGTG
TTGGCAACAT TTACCGGCTA TGGCGTGATA TTTGCGCTGT TGGCGGTTAT CGGTCTGATC
GGGGTGGGAA TACTCCACCG GCAGGTAGCT GCACCGGTGC GAGCCGGTCA AGCTTCGATG
GCGTAG
 
Protein sequence
MTTASEEVLT RYARRNFWLN VLDGSAFTFG ISLVSRFTVL PLIVERLTDA RWVQGLIPAI 
FFAGWLLPGL LTAPLIAAQP RRKPWVLLAT IGERLPFLIM GILLLTLPDL PASTLLIIVL
NLYAIFATSA GLTSIAWQDL IARVIPAQRW GVFFGLQAGL GGLLGIGGGA IAAAILAQQP
FPQSAGILAL ICFGAMVVSY IFLALTVEPA QTPVPARPFH VFLRGLGPLL RSNVAFRRYL
FCRAAIALGL TGHSFLTAAV LERFQLPAAE IGLFTGVMLA AQAVGNIGLG ALADRWGHKQ
VLALAATMGM AALILALLAP TSSWFYFIFA LVGAAQAGYQ LSGFTLVFAF SPPEERTTYI
GVANLALAPV AALGPIVVGV LATFTGYGVI FALLAVIGLI GVGILHRQVA APVRAGQASM
A