Gene Cagg_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0124 
Symbol 
ID7266862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp171853 
End bp172137 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content57% 
IMG OID643564996 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_002461512 
Protein GI219847079 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000291811 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000109119 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTAGTGA AACTGTTCGT CGGAAACTTG CCGTGGAGTG TTGGCGATGC TGAGCTGGGT 
GCGATCTTCG AGCCGCACGG CGAAGTACAG AGTGCGCGCG TCATCAATGA CCGTGATACC
GGTCGGTCGC GTGGCTTCGG ATTTGTTGAG ATCGAAACCA ATAATGTCGC CGGCGTGATC
CGCGCAACCG ACGGCCTTGA GATTGGCGGG CGCAATCTGC GCGTGAACGA GGCAGAAGAT
AAGCCGCGTA GTTCATCGCG TGGTGATTTT CGCCGTCGCT ATTGA
 
Protein sequence
MLVKLFVGNL PWSVGDAELG AIFEPHGEVQ SARVINDRDT GRSRGFGFVE IETNNVAGVI 
RATDGLEIGG RNLRVNEAED KPRSSSRGDF RRRY