| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0107 |
|---|
| Symbol | |
|---|
| ID | 7266845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 150639 |
|---|
| End bp | 152276 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643564979 |
|---|
| Product | Citrate transporter |
|---|
| Protein accession | YP_002461495 |
|---|
| Protein GI | 219847062 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0878847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.704215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAG CGATTGCTTT TGTCTTTACT GTGCTGGCAA CGATGATCGT CCTGTTTGTC
AGCGATCGGC TTCGGCTCGA TCTCGTTGCC ATCATGGGCA TACTTGCACT CTTGCTCGGT
GGCATTCTCA CACCGGCCGA AGCGGTTGCC GGTTTTGGCG ATACTACTGT ACTCCTTATC
GCTGCACTGA TGATCGTCGG TGATGGATTA TTGCAAACCG GTGTCGCAGC GTGGATCGGG
CAACGACTCG GACAAATCGC CGGTGTGAAC GAGCGACGTA TCTTGGTGAC GTTGATGATA
CCGGTTGCAA TACTGTCGGC GTTTATTAGC TCTACCGGTA CGGTCGCTAT TATGTTGCCG
ATTGCGATCA ACATTGCCCG TCAAGCCGGT ATTAGTCCGT CACGTCTCTT GTTACCGGTT
GCGTATGCCG CCTTGACCGG CGGAATGCTA ACGCTCGTTG GGACACCGCC CAATATCATT
GCTGCCGAAG CACTCATTGC AGTTGGTCGA CCTTCGCTTG GTTTTTTTAG CTTTACTCCC
ATCGGTAGCC TTGTGATCAT TGCTGTCACG TTGGTTATGG TACTGTTTGG AAACTGGTTA
CTACCGATGA GGGTTGTCTC ACCTACCGAA GATACCCATG GCCCAACCCT TGCCGAACTA
GTCGCCGATT ATCGTTTGAC CGAAGGATTG GCGCAGGTGC GGGTTGCACC AGATTCGCCG
CTGGCCGGCT TAACGTTGGC AGAAGCTCGG TTGCATAGTC GATACGGCGT AACGGTTGTC
GGGATTCGCC GTTGGTCAGA CGGTCAGGCT ATTCCCAGCC CGGCTCGGGC GGTAACTGCC
GCAACCCGTA TTTTGGCCGG TGATCTGCTT GATGTGATCG GTGATGATGC AGCGATAGCG
ACAATGTGCC GCACTGAGCG TGTCATCCCA CAAACGCTGC AACTCGATCT CCCGTTTGGG
CCAGAGTTAC ACGTAATGGA AGTCGCGTTG ACACCACGCT CTCGCTTTAT CGGTCAAACG
GTTGCTACGG CTGAATTACG CCAACGCTTT GGGGTGACGG TCTTGGGTGC CCGTCGGCTT
GGTCTGCCGT TTACCGGTGA TTTGGCGCAC GAGACGTTGC GGTTTGGTGA TACCTTACCG
GTGGCCGGTA GCCCAACCCA ATTGACCAAG ATTCTGAATG AACAGCGTAC CTTCGGAGAC
CTGGCTGTCG TGGCATTGCC ACGCGATCTT AGCACTAGTA GCGACCGGTT TCATCGACGG
GCATGGCTGG CAATTGCGAT CGTAGTAGCG ATGCTGGTGT TGATGACAGG TGACTGGTTA
CCAACTGTGA CGGTAGCGTT GTTAGCAGCG GTAGCTATGG TACTGAGTGG TTGTGTGCCG
ATCAATGATG TCTATCGTCG GCTCAGTTGG GAAAGCCTTG TCCTGATCGC AGCAATGTTG
CCAATGGCGA CGGTACTAAC CAAGACCGGC GGTGCTGCTC TGATCGCACG CGAATTGGCG
ACTGCGTTAG GCACATTTTC ACCGTTGGTC GTTCTAGCCG GTATCTTTAT CATCACCGGT
TTTCTGAGCC AGTTCATCTC GAATACTGCT ACTTCTGTGT TAATGATGCC AATTGCTTTG
GTATTGTTCA GCAGTTAG
|
|---|
| Protein sequence | MTTAIAFVFT VLATMIVLFV SDRLRLDLVA IMGILALLLG GILTPAEAVA GFGDTTVLLI
AALMIVGDGL LQTGVAAWIG QRLGQIAGVN ERRILVTLMI PVAILSAFIS STGTVAIMLP
IAINIARQAG ISPSRLLLPV AYAALTGGML TLVGTPPNII AAEALIAVGR PSLGFFSFTP
IGSLVIIAVT LVMVLFGNWL LPMRVVSPTE DTHGPTLAEL VADYRLTEGL AQVRVAPDSP
LAGLTLAEAR LHSRYGVTVV GIRRWSDGQA IPSPARAVTA ATRILAGDLL DVIGDDAAIA
TMCRTERVIP QTLQLDLPFG PELHVMEVAL TPRSRFIGQT VATAELRQRF GVTVLGARRL
GLPFTGDLAH ETLRFGDTLP VAGSPTQLTK ILNEQRTFGD LAVVALPRDL STSSDRFHRR
AWLAIAIVVA MLVLMTGDWL PTVTVALLAA VAMVLSGCVP INDVYRRLSW ESLVLIAAML
PMATVLTKTG GAALIARELA TALGTFSPLV VLAGIFIITG FLSQFISNTA TSVLMMPIAL
VLFSS
|
|---|
| |