Gene Cagg_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0105 
Symbol 
ID7266843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp148712 
End bp149236 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content58% 
IMG OID643564977 
ProductThiJ/PfpI domain protein 
Protein accessionYP_002461493 
Protein GI219847060 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.438693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.815938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGG CAGGAAAGCG GATCGCTATT CTATTGGCCG AAGGGGTAGA AGACCTGGAG 
TTCTACGTGC CGATGATGCG GTTGCAGGAA GAGGGAGCCG ATGTGGTCGC TGCCGGGCTA
GACTTACGAC CGGTGCGGGG GAAGAATGGG CTTGAGATCA CACCAACTAC TACCGTTGCC
GATCTGCGTA CCGATGATCT CTTTGGTCTT GTATTGCCCG GTGGCTGGGC ACCGGATAAA
CTGCGTCGGT ATCGCGAGGT GACCGACCTG GTACGCGCTA TGGATGCTGC CGGTAAGGTG
ATCGGGATCA TTTGTCACGG TGGTTCAATT GCGATCTCGG CGGGTATTGT CCGTGGCCGT
CCGGCTACCG GTTCGACCGG GATTAAAGAC GATCTGATCA ATGCCGGTGC CCACTGGCGT
GATGAAGCGG CGTTCCGTGA TGGCAATCTC GTGTGGGGGC GGGTTGTCGC AGATATTCCC
GCTTTTTGTC GTGAGCTGGT TGCAGCATTG GTTGAGCGCG TATGA
 
Protein sequence
MRLAGKRIAI LLAEGVEDLE FYVPMMRLQE EGADVVAAGL DLRPVRGKNG LEITPTTTVA 
DLRTDDLFGL VLPGGWAPDK LRRYREVTDL VRAMDAAGKV IGIICHGGSI AISAGIVRGR
PATGSTGIKD DLINAGAHWR DEAAFRDGNL VWGRVVADIP AFCRELVAAL VERV