Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0087 |
Symbol | |
ID | 7266825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 122991 |
End bp | 123893 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643564960 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002461476 |
Protein GI | 219847043 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGCA AACACTGGTT GAGCTATAGT CTGCGTGACA GCGGCATGAA CCCGCGCGGG TTCCATCCGA GCCAGCTCAA GTTTTATCTG GTGCTGGTTC CGTTGGCAGC CTTTATGCTG CTGCCGATTG TCTTTATCTT CTCGCACGCT TTCAAGCCGC CAGAGGAGTT GTTTGCGTAT CCACCACGCT TTTTCGTGGT GCGGCCAACG CTCAAGAACT TTACCGATCT CTTTGCCCGC CTGTCAATCT CAGAAGTACC GGTGAGCCGC TACCTCTTCA ATAGCGTTAT GATAACCCTC TTGACCGTGT TGGCCTCGGT GGGAGTCGGC TCGACAGCGG CGTTTGCACT CTCGAAGAAG CGATTCCGGC TCAAGAATAC GCTGTTTGCG ATCAACACCG TCGCGCTTAT GTTTGTGCCG GTGGCGGTGA CGATCCCGCG CTTTCTGATT ATCCAGCAGC TTGGCCTGCT CAATACCTTC TGGGTACACA TTTTGCCGAC GCTGGCTATG CCGGTCGGTT TGTTCCTACT CAAACAGTTT ATGGATGCGT TGCCCAACGA GATGATCGAA GCCGCCCAAA TTGACGGGGC CAGCGATCTA CAAATCTACT GGCACATCAT CTTGCCGCTA ACCAGACCGG CACTGGCGAC GATTGCCATT CTCGCCTTTC AGGCCTCGTG GAATAACGTG GATACGTCGG CGATGTACAT CAATGACGAA CAGCTCAAGA CCTTCGCCTT CTATCTGTCC AGCCTGACCT CAACCACGGC GGGAGCCAAT TTGGTCGCCG GCCAGGGGAT GGCCGCTGCT GCTTCGTTAA TCGTTTTTCT GCCCAATCTG ATCATCTTTA TCCTGTTGCA GAGCCAAGTG ATGAGCACGA TGTCGCATTC GGGGTTGAAG TAA
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Protein sequence | MRRKHWLSYS LRDSGMNPRG FHPSQLKFYL VLVPLAAFML LPIVFIFSHA FKPPEELFAY PPRFFVVRPT LKNFTDLFAR LSISEVPVSR YLFNSVMITL LTVLASVGVG STAAFALSKK RFRLKNTLFA INTVALMFVP VAVTIPRFLI IQQLGLLNTF WVHILPTLAM PVGLFLLKQF MDALPNEMIE AAQIDGASDL QIYWHIILPL TRPALATIAI LAFQASWNNV DTSAMYINDE QLKTFAFYLS SLTSTTAGAN LVAGQGMAAA ASLIVFLPNL IIFILLQSQV MSTMSHSGLK
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