Gene Cagg_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0084 
Symbol 
ID7266822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp117692 
End bp118561 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content53% 
IMG OID643564957 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002461473 
Protein GI219847040 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGA GCGAATTATG GCGGCGCTTG CGCCTGCGCG AAAACCTGCA AGGTTATCGC 
TTTCTGCTGC CATGGATCAT CGGCTTCACG CTGTTTACGG CAGCGCCGCT GGCGCAAACC
TTTCAATACA GCCTGAGCAA CGTCAAAGTT GCGGTGACTG GGATTGAGTT AGCAGCGGTG
GGTTGGCAAA ACTACACTCG CGCTCTGTTT ACTGATCCGA CCTTTGTGCA ATTATTGATT
GAATATCTGA TTGAAATGGC GATCTCGGTA CCGATCATCT TAATCTTTTC GCTGATTATC
GCCCTCTTTT TGAACGTGCC ATTTTGGGGC AGAAGCATCT TTCGCACCAT CTTCTTTTTG
CCGGTCGTGA TCACCAGCGG GCCGGTGATC GGCGAACTGG TCGCACAAGG GGCAACCTCC
GCGCCACAAG TGGCGTCATC AGCGGCGGTA ACGGCTTTTG TCGCCCAACT GCCGGCGCTG
TTGCGCGAGC CGGTGCAGTA TCTGTTGACA TCGTTCATTC TGATTTTGTG GTTTTCGGGT
GTGCAAATTC TGATCTATCT GGCCGGATTA CAAAAAATTG ACCGCTTCGT CTACGAAGCC
GCCGCCGTCG ATGGCGCGTC GGCGTGGGAG ACGTTTTGGA AGATTACCTT GCCGGCGCTG
ACGACGACCA CGCTGATCAA TGCGCTGTAT ACGGTTATTA CGCTCTCGCA TTTTTCTGAG
AACAAGGTGA TCAAATACAT CGCTGCCCGC ATTTACGACG TTGAAGGCGG GATTGGCTAC
GCCAGTGCGA TGGCGTTTTT GTATTCGCTG GCGTTGATTG TGTTGTTAGT GGCAACCTTT
ATGGTACTAC GCCCGCGGGT GAAGGATTGA
 
Protein sequence
MGKSELWRRL RLRENLQGYR FLLPWIIGFT LFTAAPLAQT FQYSLSNVKV AVTGIELAAV 
GWQNYTRALF TDPTFVQLLI EYLIEMAISV PIILIFSLII ALFLNVPFWG RSIFRTIFFL
PVVITSGPVI GELVAQGATS APQVASSAAV TAFVAQLPAL LREPVQYLLT SFILILWFSG
VQILIYLAGL QKIDRFVYEA AAVDGASAWE TFWKITLPAL TTTTLINALY TVITLSHFSE
NKVIKYIAAR IYDVEGGIGY ASAMAFLYSL ALIVLLVATF MVLRPRVKD