Gene Cagg_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0083 
Symbol 
ID7266821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp116560 
End bp117489 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content54% 
IMG OID643564956 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002461472 
Protein GI219847039 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGC TACAGTTCGA TTATCTACGG CGAGTGGCAT GGGGCGCGCA TAACCGAACG 
GGGATCATTC CGACCGTCTT GCTCTATGCC GTCTTGATCG CCATCGGATT TGTCTACCTT
TACCCATTGC TATTTATGGC GATTACCAGC TTCAAAAGTC CAGATGATCT GCTCAACCCA
ATGGTGCAAT GGGTGCCAAC CGAGCTGTAT CTGGGCAATT ATCAGAAGGC ATACCGGGTG
CTCAACTACC TCGATACGCT GCGCTCGACG ATTGTGGTCA GTGTGGCTCC GACGGCCTTG
CAGGTGGTGG TCTGCGCGCT GGTTGGCTAT GGCTTGGCCC GCTACCGGCT CTGGGGTAAG
CCGCTGCTCT TTGCCCTGAT CTTCGCCACG TTTGTCATCC CACCGCAAAA TACGATCATC
CCGCAGATGC TCAACTATCG TTATCTCAAT CTGTTAGGAA CGATTTGGGC ACTGCTTATT
CCGGCGGTGT TTGGCCAAGG GTTCAAGAGC GCGATCTTCA TTCTCATCTT CTACCAAAAC
TTTCTCTCGC TACCCCGCGC GCTCGAAGAA GCCGCCCGGC TCGATGGCGC GTCCGATTTC
ACCGTCTTTT GGCGAATCGC GCTGCCCGGC GCAGTGCCGG CCTTTATCGT CTCGTTCATC
TTCTCGGTGG TTTGGTATTG GAACGAGACG TACCTGACGA CAGTGTTTTT GGAAGGCGGT
ATGCAGACGT TGCCGATGCA ACTGGCCAAA TTTACCCAAG CATACGAGAA TCTCTACCCC
GCCAGTATGG TGAATATCTT CGACCGCCTG AACGAAGCGG TCAAGATGAG CGGGACATTT
CTGACCATTT TGCCCTTGCT GGTGATGTAT TTCATCTTGC AACGCTGGTT TGTCGAATCG
ATTGAACGAT CAGGACTCGC CGGTGAATAA
 
Protein sequence
MRRLQFDYLR RVAWGAHNRT GIIPTVLLYA VLIAIGFVYL YPLLFMAITS FKSPDDLLNP 
MVQWVPTELY LGNYQKAYRV LNYLDTLRST IVVSVAPTAL QVVVCALVGY GLARYRLWGK
PLLFALIFAT FVIPPQNTII PQMLNYRYLN LLGTIWALLI PAVFGQGFKS AIFILIFYQN
FLSLPRALEE AARLDGASDF TVFWRIALPG AVPAFIVSFI FSVVWYWNET YLTTVFLEGG
MQTLPMQLAK FTQAYENLYP ASMVNIFDRL NEAVKMSGTF LTILPLLVMY FILQRWFVES
IERSGLAGE