Gene Cagg_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0059 
Symbol 
ID7269056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp85880 
End bp86518 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content56% 
IMG OID643564932 
ProductFormiminotransferase-cyclodeaminase 
Protein accessionYP_002461448 
Protein GI219847015 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3404] Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.279753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT CATTGATGCA ACAGCCACTC GGCGCCATTC TCGATGCGCT TGCCTCACGT 
GCCCCTACCC CCGGTGGTGG GAGTGTGGCA GCACTTACCG GTGCTATGGC AGCCGGTTTG
GTGAGCATGG TGTGTGAACT GACCATCGGG AAGCCACAAT TTGCCGAAGT AGAAAACGAG
TTACGGGCTA TTCACGCTCA GGCCGAGCAA TTGCGTGCCG AATTACAACG GCTGGCCGAT
GAAGATATTG CCGTCTTTAA TCGTCTCGCA GCGGCGTACA AACTGCCGCG CACAACCGAG
GCCGATGCAG CGACACGCAA GACAGCAATC CAGCAGATTA CCCGTTTGGC TGCCGAGGTA
CCGTTGCGAA CTGCACAGGC CGCAGCAGCA TTACTCCCGC TCTGCACGAC CCTGGCAAAC
AACTGTGCGC GCCTGGTGGT CAGTGATGTT GGGGTTGCCG CTTTATTGGT ACGCGCCACC
GTTCAGAGTG CTGCATTGAA CGTTGAGATT AATCTGGCTG CACTTGAGGA TCAGATCTTT
GTTCGCGAAA CGCGCGCCCA GTTGCAAGAT TTACTGATCG GGCTTGGTGA TGAAGTTGAT
GGTATTGTCA CCATTGTCCG GGGAAGGATG GTCGGATGA
 
Protein sequence
MSESLMQQPL GAILDALASR APTPGGGSVA ALTGAMAAGL VSMVCELTIG KPQFAEVENE 
LRAIHAQAEQ LRAELQRLAD EDIAVFNRLA AAYKLPRTTE ADAATRKTAI QQITRLAAEV
PLRTAQAAAA LLPLCTTLAN NCARLVVSDV GVAALLVRAT VQSAALNVEI NLAALEDQIF
VRETRAQLQD LLIGLGDEVD GIVTIVRGRM VG