| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0057 |
|---|
| Symbol | |
|---|
| ID | 7269054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 80241 |
|---|
| End bp | 82853 |
|---|
| Gene Length | 2613 bp |
|---|
| Protein Length | 870 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643564930 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002461446 |
|---|
| Protein GI | 219847013 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.279579 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTAC CATTTCCATC CCGTCGCCCA TTGCTACTCC TTACTATATG CATGCTTAGT
TGCACTTTGC TCCTCGCGAT GGTGCCGTTG GGGGTTGTAC GCGCTTTGGT TGACGAAACG
GGGACCGATC AAATTATCGA TAACTCGCAG GCCGATTTTG CCAGCGGGGT GTTTCAGCGC
ACAGTCGTGG CGGCAGCACC AAGCTCGCCG AGTGCCCCAG ATGTGGTCGG CGCTGTGGAG
CTAGCACCGG TCGGGGCGTT AAACCGCAAT AATTGGTCAA CCGCGAGCAC AACATTGCCA
TTGCCGTTGA GCGATGCTCC TGTAGTGTCA CTTGGTAAAT ATCTGTTTGT CATCAGTGGT
GCTACGACAA TAGATAGTAA TGGTGAGAGT GTCTCCAACT CAAACTATGT CTTTCGTGGT
GAGATTAATC AGGCGACCGG TGCATTTGTG ACGGTGACCA GTCCACACCC TGCACCGGGC
AATGATGCGT TTAAGGCCTT TGTCATCCAA GGCGCCGATC CCGGTTCTGA ATGTGACATC
GAGATTGCCG GTCGGTCGCG ATCGGCAGCC GTGGCTGTAC CGGCAACTAC CGGATCGAAT
CTTGGCTATA TCTTTATTGT CGGCGGTAAT ATGTACGATC AAAATTGTGC GACGTACAAC
TTCTCGACTA ATCTTGTGCA ACGGGCAACG GTTGATGCTA ACGGTGATAT TACCGCTTGG
AGCACACCGG ATACTTGGCG GTTTCCTACC CTCGACAGTA ATGGTGAGAT TATCACCAAT
CCGGCTTCGC CTGACCTCCG CGGAGTTCAG GACTTACAAC TCGTGTATGT TCGGACCAGC
GCAGGGAATG ACTTTATCTA TGCGATAGGC GGCTTAAGTG TTGCGCCAAG TCAGCTTCTA
CAGCAAGATA TTTATCCGTA TGTCTTCTAC ACCAAAGTCG ATACCAACGG TAATCTGACG
CATCCCACTA ATTCGTCTGC CGGAACGGTT TGGGCAAAGT TGGCCGATTT GCCGTTCCCC
CTTCACTCTG GGACGGCGCT AGCCGTTAAC ACCACTCAGA TCGAAGGTGG CGCACCGGTA
CAGAAAGATG CGATCTTTTT GCTCGGTGGC TGTACTGAGA TTGATTGTAC GTCGCTTAAT
ACCTCGGTAC GGCGGGCCGA TGTCAATCCG ACGACCGGTG CGTTAACGTG GACCAACCAG
GTTGCTGCTA CAGGTAGTGG GACGCAGGCG ATTAACATTC AGGCTCGACA TAACGTTACA
GGTTTGAGTT TCAACAATCG TATCTATTAC ATTACCGGTT CGACGGTTGC CAATTTTCCC
GGTGCCGGCG GGGCAACTGC AACGATCCCG GTCGCAATCT TTAACGATCA ATTCTTGTTA
GAAGATTTGA CCAATAGTAG TATTTACTTC GTCGGTACCA ATGAGACGAA TGACCGTGTA
TTACCAGAAC CATACCGACG GGTCGGTGCA GCAGCAGCAC TTATCCCGGC AGTACCACCT
GATAATGCGA CAAGTCAAGT CTATGCAGCG TGGATGTATG TGATCGGTGG TGCTGATGAA
AATAACCAGC CAACGTCAAC CATCTTTGTT GGTGGTGTAG GCAGTGCAAA TGAGACGACC
AGTGCGACCC GGGCACCAGA AGGTTGGTAC TATTCGCAAC CATTCCCGGT ACTAACCGAC
AACGAAACAT CGCGGCTACT GGCTCTCAAG TGGTTTGTCG ATCTCAACCG TCCATCTAGC
AATCCTGAGG CCGATATCCG CATTCAATTC CGCGCCGCCG TGACAAGTGG TACTTGCCGA
GAGAGTGATT TTGATCCTTC GCCTTCTATT TCTAATCCAG AACGTTGGCG AGCAATAGAT
GCGAATCCTG ATCCTGTGTT GTACTCTAAC AACGGGCTTA ACCAGGTACG CTTGATCAAT
GCCTTCCCAG ACGAAGAGAT TCAAGCAACC TGTATGCAGT ATCGGGCGCA GCTCATTCAA
GATCCCGGTG ATCGAACCTT CTCGCCGAAG CTCCTCTACT TCGCGGTTGA GAAGATTGTC
GCGGCTAAAC CGGACATTAT TATCGACACC TTCGATGTTC AGACGAACAA CGGAAGTTTT
AGCAATATTG TCTTGACCTT GCGCAATCTG CGCAAGAATA GCCTTGCGGC GACGCGCAGT
GTAGCGGCGG CGAGTGGGGA TGGTGGTTTC TTTGTCGATC TCTGCATCGC TCGGCGGACC
GATCCGGATG TTCCGGCGCT TACCTCTGTG CCGGCTCCTG ATCCAAACGC CGGTGCTTCA
GCGACTCCGG CATGTGCGAC AGTATCGGTA CAACTCCCGA AGGGGCCATT TATACCGGGT
GCATCGTACA CCGTTCTATT AAACAATTGG GTTAACAGTA ATAATGGTGA ACCGGCGGAC
TGGAATACGA TTTTCGGTAC GCCGGGCACG TATGACATCG GGATTGTGGT GGATTACAAC
GCGATGACCG GCGAAGATGT TGAAGGGCAA AGCAATAACC GTGGTGAAAG TCCATCGGCG
CCGAATGGGA TTATTCGGAC TATCACCGTT GTTGCACCAC CCACACCTGA ACCGGAGTCG
ATAAAGGTCT TTGTACCGGT CATTTATCGA TAG
|
|---|
| Protein sequence | MALPFPSRRP LLLLTICMLS CTLLLAMVPL GVVRALVDET GTDQIIDNSQ ADFASGVFQR
TVVAAAPSSP SAPDVVGAVE LAPVGALNRN NWSTASTTLP LPLSDAPVVS LGKYLFVISG
ATTIDSNGES VSNSNYVFRG EINQATGAFV TVTSPHPAPG NDAFKAFVIQ GADPGSECDI
EIAGRSRSAA VAVPATTGSN LGYIFIVGGN MYDQNCATYN FSTNLVQRAT VDANGDITAW
STPDTWRFPT LDSNGEIITN PASPDLRGVQ DLQLVYVRTS AGNDFIYAIG GLSVAPSQLL
QQDIYPYVFY TKVDTNGNLT HPTNSSAGTV WAKLADLPFP LHSGTALAVN TTQIEGGAPV
QKDAIFLLGG CTEIDCTSLN TSVRRADVNP TTGALTWTNQ VAATGSGTQA INIQARHNVT
GLSFNNRIYY ITGSTVANFP GAGGATATIP VAIFNDQFLL EDLTNSSIYF VGTNETNDRV
LPEPYRRVGA AAALIPAVPP DNATSQVYAA WMYVIGGADE NNQPTSTIFV GGVGSANETT
SATRAPEGWY YSQPFPVLTD NETSRLLALK WFVDLNRPSS NPEADIRIQF RAAVTSGTCR
ESDFDPSPSI SNPERWRAID ANPDPVLYSN NGLNQVRLIN AFPDEEIQAT CMQYRAQLIQ
DPGDRTFSPK LLYFAVEKIV AAKPDIIIDT FDVQTNNGSF SNIVLTLRNL RKNSLAATRS
VAAASGDGGF FVDLCIARRT DPDVPALTSV PAPDPNAGAS ATPACATVSV QLPKGPFIPG
ASYTVLLNNW VNSNNGEPAD WNTIFGTPGT YDIGIVVDYN AMTGEDVEGQ SNNRGESPSA
PNGIIRTITV VAPPTPEPES IKVFVPVIYR
|
|---|
| |