Gene Cagg_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0051 
Symbol 
ID7269048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp73349 
End bp74011 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content53% 
IMG OID643564924 
Productglutaredoxin-like domain protein 
Protein accessionYP_002461440 
Protein GI219847007 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3634] Alkyl hydroperoxide reductase, large subunit 
TIGRFAM ID[TIGR02187] Glutaredoxin-like domain protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.134745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.790118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTTA TGCAAGAAAA AGATCGGCAA GCGGTGCGGG AAGCGTTTAG AGGTTTACAA 
CATCCGGTCG AGTTGGTGTT GTTTACTTCA GCGGACAGTG GCGAATACAG TGAAGTAACC
CAAGAGCTGC TCCAAGAGGT GGTAGAGCTT AACCCGCTAT TGCGCTTGAA CGTTTACGAT
CTTGAAAAAG ATGGCGCATA TGCTGCCGAA CTCGGTGTTG ATAAAGCACC GGGGATTGTC
TTTTTGTCCG GCGAAGAGCG CAAAGACAAC GGCATACGCT TTGCCGGTCT ACCAAGCGGC
TACGAGTTTG CCTCATTGAT CGAGGCAATC CGCTTAGCCG GAGGAGCTAC CCAACCCGAT
TTGCAACCGG CAACGCTGTC GCTGTTAGAG ACCATTAAAG CCCCAATGCA CTTACAAGTC
TTTGTCACAC CGACCTGCCC TTACTGTCCA CGTGCGGTAG TTATGGCGTA CCGATTAGCA
CTGGCTAACC CGTACATCAC CGCCGAGGGC ATCGAAGTGA CTGAATTCCC TGAACTTGGC
GATCGCTACG CGGTGATGGG TGTCCCCAAG ACGGTGATCG ACGATCTGGT GCATATTGAG
GGTGCTGTAC CCGAAGGTAT GATGGTCAAC AAACTACGCG AGGCGATCGC CGCTGCGGCC
TAA
 
Protein sequence
MALMQEKDRQ AVREAFRGLQ HPVELVLFTS ADSGEYSEVT QELLQEVVEL NPLLRLNVYD 
LEKDGAYAAE LGVDKAPGIV FLSGEERKDN GIRFAGLPSG YEFASLIEAI RLAGGATQPD
LQPATLSLLE TIKAPMHLQV FVTPTCPYCP RAVVMAYRLA LANPYITAEG IEVTEFPELG
DRYAVMGVPK TVIDDLVHIE GAVPEGMMVN KLREAIAAAA