| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0043 |
|---|
| Symbol | |
|---|
| ID | 7269040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 64886 |
|---|
| End bp | 66121 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643564916 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_002461432 |
|---|
| Protein GI | 219846999 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGGT TTGCTATCGA ACTCGCCGAT ATTCAAGCTG CCCGGCGTGC CTTGCGCTCG
ATAATTTTGC CGACGCCGGT ACTGCCTGCT ACCCGACTCA GCGCGGAGCT AGGCGGGCCG
ATCTTTTACA AAGCTGAGAA TACCCAACAG AGTGGTTCAT TTAAGATTCG GGGCGCGTAT
AACACCATCG TTCATCTTTC ACCCGAAGAA AAGGCGCGTG GCGTGATCGC ACCCTCCGCC
GGGAACCATG CCCAAGGTGT TGCCCAGGCT GCACAATTAC TCGGCGTAAA AGCAACGATT
GTTATGCCCG AACGTGCTCC GTTGACCAAA GTGGTTGCCA CCCGTCGGCT CGGCGCCGAA
GTCATCCTAC ACGGTGCGAC GTTTGATGAT GCAGTTGCTT ACGCTCATAC TTTGAAGGAA
GAACGAGGTC TGACGTATGT CCATGCGTTT GATCATCCGC GTGTGATTGC CGGTCAAGGA
ACTATCGGGC TGGAATTGGT TGAAGCCCTC CCCGATCTGC AACAACTCAT CGTTCCGATT
GGGGGTGGTG GTTTGATCGG CGGCATTGCC CTCGCCGTCA AGACCTTGCT CCCGCACGTC
CGTATCGTTG GTGTACAAGC CGCCGGTTGC GCACCGGTGC CGGCATCACT CGCTGCCGGC
CATCCGGTTA CGGTACCTAC CGCACACACG ATTGCCGACG GTATCGCCGT TAAGCGTCCC
GGAGAACTAA CCTTACCGAT GATTCAAGCA CTCGTCGATG AGGTGGTCAC CGTCGATGAT
GAAGAGATTG TGATGGCGAT AGCCCACGTC TTGCAATATA GCCGGCTAGT GGTTGAGGGT
GCCGGTGCAG CCGGTGTGGC AGCACTGCTC AGTGGGAAGG TGCCGGTCCA ACCGAATCAG
GTCACCGCGA CCATTCTCTG CGGTGGGAAT ATCGACGCCA ACCTGCTCAT GCGCGTGATC
GAATATGCGC TGGTGCGACA GGGGCGCTAC CTCCTCCTCC GTACCAGTGT CGACGACCGA
CCGGGTGGAT TAGCAGCGCT CGTCAATCAC GTTGCCTCGA CCGGTGCGAG TGTAATGGAC
CTGTTCCATC GCCGGGGGAT GTGGCGAGTG CCGATTGACC GTGCCGGTGT CGAGTTGATC
CTTGAGGTGC GCGATGAGGA GCATACCCAA GCAGTGATCG ATTCCCTGGA ACGGGCCGGG
TTCCATTGTG AACGCGAATC GAATTGGCCG TTGTGA
|
|---|
| Protein sequence | MNRFAIELAD IQAARRALRS IILPTPVLPA TRLSAELGGP IFYKAENTQQ SGSFKIRGAY
NTIVHLSPEE KARGVIAPSA GNHAQGVAQA AQLLGVKATI VMPERAPLTK VVATRRLGAE
VILHGATFDD AVAYAHTLKE ERGLTYVHAF DHPRVIAGQG TIGLELVEAL PDLQQLIVPI
GGGGLIGGIA LAVKTLLPHV RIVGVQAAGC APVPASLAAG HPVTVPTAHT IADGIAVKRP
GELTLPMIQA LVDEVVTVDD EEIVMAIAHV LQYSRLVVEG AGAAGVAALL SGKVPVQPNQ
VTATILCGGN IDANLLMRVI EYALVRQGRY LLLRTSVDDR PGGLAALVNH VASTGASVMD
LFHRRGMWRV PIDRAGVELI LEVRDEEHTQ AVIDSLERAG FHCERESNWP L
|
|---|
| |