Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0032 |
Symbol | |
ID | 7269029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 48686 |
End bp | 52276 |
Gene Length | 3591 bp |
Protein Length | 1196 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643564905 |
Product | methionine synthase |
Protein accession | YP_002461421 |
Protein GI | 219846988 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.392993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCGAC CAACCTATTT GCAAGCATTG GCTGAACGGG TGTTAGTCTA CGATGGTGCG ATGGGCACGT CCATCGATAC CTTCGATCTT ACCGCCGAGG ATTACGGAGG TGAGGCAACG TTTGGTTGCC GTGATTATCT GGTGATCACG CGGCCCGATG TCATTGAGTC GATCCATACC TCGTTCCTTG AAGCCGGCTG CGATGTTATC GAGACGTGTA CGTTTCAGAG CACACGCCTC CGGTTGGCCG AATGGGGTCT TGGTGATCGT ACCATCGAGA TTAACCGTGC TGCTGCTGCG TTAGCCCGTC GCGTTGCCGA CCGGTTCGCG GCCCGTGATG GTCGTCCCCG CTACGTCGCC GGGTCAATCG GCCCAACCGG CAAGCTACCA TCGTCAGACG ATCCGGAACT GAGTAATATC ACTTTTGCCG AGTTGTCGGA TATCTTCCGC GAGCAGGCGA TTGGCTTGAT TGAGGGTGGG GTTGATCTGC TGTTGGTCGA GACGAGTGTC GATATTCTTG AAGTCAAAGC TGCGCTCGAT GGTATCCGAC GGGCAAAGAT CGATCTGAAC CGACCGGATA TTGCGGTGCA AGCACAAGTC TTTCTCGATC TGTCGGGCCG TATGCTACTC GGAACCGATG TGCCGGCTAT GATCGCGACC CTTGAGGCGA TGCCGGTCGA TGTGATCGGT CTGAATTGCG GTACCGGCCC GGAACATATG CGTGCCGCTA TCCAGTATCT GACGGCTCAT TCGCGTAAAC CGATTTCATG CATTCCCAAC GCCGGTTTGC CGCTTGAAGT CGAGGGGCGT ACCGTCTATC CAATGGAACC GGAGCCATTC GCGGAGGTAC TGGCCGAGTT TGTTCGCGAT TACGGTGTAG CGGTGGTCGG CGGCTGCTGC GGTACTCGTC CGGCACATAT TGCTCGCTTG CGCCAATTGC TCGGCAATGA TCCAACTCCG AAAGTGCGGC AGGTCGAGTA TATTCCGAGT GTTAGTTCGG GGATCCGTGC CACGGCGCTG CGCCAGGATG CTACGCTCAC AATGATCGGC GAGCGACTGA ATACGCTCGG TTCACGGAAA GTGAAACGGC TGCTGCTGCG TGACGACTAC GACGGTGCGT TAGAAGTGGC CCGTGAACAG GTCGAAAGTG GTGCGCACAT GCTCGATGTT TGCGTGGCAA TGACCGAACG CAGCGATGAG CGTGAGCAAA TGACCCGCTT GATCAAGAAG CTGACGCTGA ATATCGAGTT GCCGCTGGTG ATCGATACCA CTGAGGCTGA AGTTCTCGAG GCGGCACTGT CGATCTATCC CGGTCGGGCA TTGATCAATT CGGTCTCGCT TGAGGGCGGA CGTGGCGCGA AGATCGATAA GGTGTTGCCG TTGGCGGCGC GCTACGGTGC CGCTGTGATC GCGATGACAA TCGACGAAGA GGGTATGGCG CACACCGCCG AGCGAAAAGT GGCCATTGCC GAGCGAATTG CTCAGATTGC CCGCGATGAG TATGGATTGC CCGCCGAAGC GCTGGTGTTC GATGTGCTGA CCTTCCCGAT TACGACCGGT CAGGAAGAGT TGCGTTATTC GGCTATCGAG ACGCTCGAAG GTATCCGCTT GGTCAAGCAA CGTATCCCCG GTTGTTTCAC GACGCTTGGG GTGAGTAACC TCAGCTTCGG TGTTGCTCCG CATGCCCGCG CCGCGCTTAA CTCGGTGTTT CTCTACCACG CGGTAGCAGC CGGCCTCGAT ACGGCCATTA TCAATCCGGC TCATATTACT CCCTACGCCG AGATCGATCC GGTGCAGCGC GAGTTGTGTG AAGATCTGAT CTTTGCCCGT CGTGACGATG CGTTGGCGCG TTTCATCGCC TATTTCGAGC AGCATACCGC AAGTAGTGAT AACGAGCGCG AAGATCCCAC CGCCAGCATG ACGGTCGATC AGCGGCTACA CTGGAAGATT TTGCACCGCA AGAAAGAGGG TATTGAGGAC GATATTGATC AAGCGGTTGA TGAGCGATTG CAAGCCATTG GACTGCGCCT GAGCGATCCG GCGGCAGCAG TGCGCGATGA TCAAGGGGCA TCACCCCAGG GCCGCGCGGC AGTTGAGGTG CTGAACAACG TCTTACTACC GGCAATGAAG GAGGTTGGCG ATCTCTTCGG TGCCGGTCAA CTCATTCTCC CGTTTGTGTT GCAAAGTGCT GAAGCGATGA AGAAGGCGGT TGCCCGCCTC GAACGGTACC TCGACCGGGT AGAAGGGACC AGTAAAGCCA AAGTCGTGTT GGCGACGGTG TACGGCGATG TCCACGACAT CGGCAAGAAT CTGGTTAACA CGATTCTCTC CAACAACGGC TATACGGTCT ACGATCTCGG CAAACAGGTG CCGATCAATA CGATTGTCGA GAAGGCGCTA GAGGTGCAGG CCGACGCGAT CGGTCTCTCG GCGTTGCTGG TCAGTACAAG CAAACAGATG CCCCTCTGTG TGCAAGAGTT GCATCGGCGT GGATTGCGGA TTCCGGTGTT GGTTGGTGGG GCTGCGATCA ATCGCCAGTA TGGTCAGCGT ATCACCTTTG TCGATGATGA AGAACCGTAT CCCGCCGGTG TCTTTTATTG CAAAGACGCC TTCGAGGGGC TTGAGACAAT GGATCGGCTG AGTAATCCGG CAACTCGTGA TCAATTTATC GAGCAGACCA TCCGTGAGGC AGCGAATGTG CTGCACCGAC GAATGACCGG GCGGGTGGCA TTGGCCGATC TGGGTGAGGC GGCGAGTGCG ACGGCTGCCG GAGTACGTTC GGCGGTGCGG ACCGATGTAC CGGTGCCCGT ACCTCCGTTT TGGGGGTGGC GAGCGACGAG CCGAATTCGG CTGCGCGACG TGGTCGAATG TCTTGACCGC AATAGCCTTT ACCGTTTGCA ATGGGGTGCC AAAAATGCAA AGGGTGAAGA GTGGGAACGA TTGCGGGCAG AGTTCGATCA AAAGGTGCGC GAATTGATCG CTGAAGCCGA GCGTGATGGT TGGTTGCAGC CGAAGGTGAT CTACGGCTAC TTCCCGGTGC AGAGTGATGG TCTTGAACTG ATCGTCTATG ATCCGGTCAA TCGCTCACGT GAATTGACCC GTTTTGTCTT TCCCCGTCAA CCGGCCCGTG AACGTCTCTG CATTAGCGAT TATTTCCGCA GTGTCGATAG CGGTGAGTAT GATGTCGCCG CTTTCCAGAT TGTTACGATA GGGAGCACAG TTGACGAATT AGTTGATACG TTACAGCAGC GTGGTGATTA TAGTCGCAGC TACTATATCC ACGGACTTGG CGTCAGCCTC GCCGAGGCGT TGGCCGAATA TACCAACCGT ATTATCCGAC AGGGGCTAGG TCTCGATGAG CGACGCGGTA AGCGCTATTC GTGGGGCTAC CCGGCCTGCC CCGATCTCTC CGAGCATGCT AAGCTGTGGC AAATCCTTCC CGGTGAAGAG ATCGGTGTGA CGTTGACTGA GGCGTTCCAG TTGGTGCCCG AACAAAGCAC GGCGGCGATT GTGGTGCATC ACCCCGAAGC AAAATATTTC AGCATCGGCA GCGCCGTCGA ACGCGCTGAA ACCGACGTTC AGAACCAATA A
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Protein sequence | MTRPTYLQAL AERVLVYDGA MGTSIDTFDL TAEDYGGEAT FGCRDYLVIT RPDVIESIHT SFLEAGCDVI ETCTFQSTRL RLAEWGLGDR TIEINRAAAA LARRVADRFA ARDGRPRYVA GSIGPTGKLP SSDDPELSNI TFAELSDIFR EQAIGLIEGG VDLLLVETSV DILEVKAALD GIRRAKIDLN RPDIAVQAQV FLDLSGRMLL GTDVPAMIAT LEAMPVDVIG LNCGTGPEHM RAAIQYLTAH SRKPISCIPN AGLPLEVEGR TVYPMEPEPF AEVLAEFVRD YGVAVVGGCC GTRPAHIARL RQLLGNDPTP KVRQVEYIPS VSSGIRATAL RQDATLTMIG ERLNTLGSRK VKRLLLRDDY DGALEVAREQ VESGAHMLDV CVAMTERSDE REQMTRLIKK LTLNIELPLV IDTTEAEVLE AALSIYPGRA LINSVSLEGG RGAKIDKVLP LAARYGAAVI AMTIDEEGMA HTAERKVAIA ERIAQIARDE YGLPAEALVF DVLTFPITTG QEELRYSAIE TLEGIRLVKQ RIPGCFTTLG VSNLSFGVAP HARAALNSVF LYHAVAAGLD TAIINPAHIT PYAEIDPVQR ELCEDLIFAR RDDALARFIA YFEQHTASSD NEREDPTASM TVDQRLHWKI LHRKKEGIED DIDQAVDERL QAIGLRLSDP AAAVRDDQGA SPQGRAAVEV LNNVLLPAMK EVGDLFGAGQ LILPFVLQSA EAMKKAVARL ERYLDRVEGT SKAKVVLATV YGDVHDIGKN LVNTILSNNG YTVYDLGKQV PINTIVEKAL EVQADAIGLS ALLVSTSKQM PLCVQELHRR GLRIPVLVGG AAINRQYGQR ITFVDDEEPY PAGVFYCKDA FEGLETMDRL SNPATRDQFI EQTIREAANV LHRRMTGRVA LADLGEAASA TAAGVRSAVR TDVPVPVPPF WGWRATSRIR LRDVVECLDR NSLYRLQWGA KNAKGEEWER LRAEFDQKVR ELIAEAERDG WLQPKVIYGY FPVQSDGLEL IVYDPVNRSR ELTRFVFPRQ PARERLCISD YFRSVDSGEY DVAAFQIVTI GSTVDELVDT LQQRGDYSRS YYIHGLGVSL AEALAEYTNR IIRQGLGLDE RRGKRYSWGY PACPDLSEHA KLWQILPGEE IGVTLTEAFQ LVPEQSTAAI VVHHPEAKYF SIGSAVERAE TDVQNQ
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