Gene Cagg_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0017 
Symbol 
ID7269014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand- 
Start bp27934 
End bp28608 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content54% 
IMG OID643564890 
ProductGTP cyclohydrolase I 
Protein accessionYP_002461406 
Protein GI219846973 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTA ATGACTATCA TCCAACTCAC GATCTCGACG AAGACCACTA CGAACACCTG 
ATCATTCCCG GCCGCGGCAA ACTCGAAGGG ATGACGTTTT CATCAGATCC ACGGATCGAA 
GACGCTGTTC ATACAATCCT CACTGCAATT GGTGAAATCC CAGAGCGTGA GGGTTTGCAG 
AAGACGCCAT CACGGGTGGC AAAGATGTAC GCCGAGCTAA CCGCCGGTTA TCATATCGAT 
CCACAAGCTT TGATCAACGG CGCCGTCTTC AGTGTTGCCT ACGACGAGAT GGTGCTGGTG 
ACCAATATCG ACTACTACAG CTTGTGCGAG CACCATATGT TGCCGTTCTT TGGGCAAGTT 
CACGTCGCCT ACATTCCCAA CGGCAAAGTG GTCGGATTAA GTAAGATTCC TCGGATCGTC 
GAGATGTTTG CCCGTCGCCT CCAAGTCCAG GAGCGGATGA CCGTGCAAAT TGCCGATTTC 
ATCAACGAAA CCCTTGAGCC GGCAGGAGTG GCCGTCGTGG CCGAGGGGAT TCATATGTGC 
GGGGTGATGC GAGGGGTCAA AAAGGCCAAT GCCCGTATGG TGACCTCGGC GATGCGCGGT 
GCTTTCCGTG AGGACCCGAA AACTCGTGCC GAGTTTATGG CCCATGTCAA TCGGGCAAGT 
AGTCGCCAGG ATTAG
 
Protein sequence
MSTNDYHPTH DLDEDHYEHL IIPGRGKLEG MTFSSDPRIE DAVHTILTAI GEIPEREGLQ 
KTPSRVAKMY AELTAGYHID PQALINGAVF SVAYDEMVLV TNIDYYSLCE HHMLPFFGQV 
HVAYIPNGKV VGLSKIPRIV EMFARRLQVQ ERMTVQIADF INETLEPAGV AVVAEGIHMC 
GVMRGVKKAN ARMVTSAMRG AFREDPKTRA EFMAHVNRAS SRQD