Gene Cagg_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0011 
Symbol 
ID7269007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp12116 
End bp12952 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content55% 
IMG OID643564883 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002461400 
Protein GI219846967 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00883263 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGTTA TCCACCTCGA CAATCGGCTC GCCCACTACG AAGTATTCGG GCGCGGTCAG 
CCGATCATCT TTCTGCATAG CTGGATCGGC TCGTGGCGGT ATTGGGTGCC GATCATGGAT
CTTGCTTCCG AACGGTACCG CGCCTATGCG TTCGATTTCT GGGGTTTTGG CGAGAGCGAC
CGGCGCGGTG ATCAGTTTTC GGTACCGACA TATGTTGCGA TGCTGATGCA ATTTATGGAC
CGGCTGGGCA TTGCCCGAGC GACGTTGGTG GGACATGGTA TGGGCGGGAT GGTGGCGATT
ATCGCTGCTC ACCAACATCC AGAGCGGTTC AATCGATTGC TGACCGTCGC TACGCCCCTC
CACGGCCAAG TGTTGGCCCA ACATATCAAG CCGGGGACGC TCTCTCGTTT GCTGGGCATG
AACACCAGCC AGAACGGTTG GGCGCGGATG GTACGCTCAT TACAGGTAGC GGATACCGAG
ATTCAGCAGG AGATTGAGGA AGACACGATC AGCTTGAGCG AACATGTGTT GAACCGGGTT
CACGAGTCGT TGCTCGAGAC GGACCTGCGC CCTCACATTA TTTCGTTACA GACCCCATTG
CTGGCGGTAT ACGGTGGCAA AGATCCGATT GTCAATCCGG CGCACGCCGC ATTTCTCAAC
GAGCTGGCCG AGCGCCCAAT TCAGTTGCTG GTGTTACCGA AAGCTAGCCA CTTCCCCTTC
CTCGAGCAGG CTAATACGTT TGGTCGAATG TTACTTGATT TCTTGGTTTC ACAGGGGACG
GCGATTGAAA TAAAAGAAGA GTGGCGGCGA CGGGTAAATC AACGTGAGTA TCTGTAG
 
Protein sequence
MSVIHLDNRL AHYEVFGRGQ PIIFLHSWIG SWRYWVPIMD LASERYRAYA FDFWGFGESD 
RRGDQFSVPT YVAMLMQFMD RLGIARATLV GHGMGGMVAI IAAHQHPERF NRLLTVATPL
HGQVLAQHIK PGTLSRLLGM NTSQNGWARM VRSLQVADTE IQQEIEEDTI SLSEHVLNRV
HESLLETDLR PHIISLQTPL LAVYGGKDPI VNPAHAAFLN ELAERPIQLL VLPKASHFPF
LEQANTFGRM LLDFLVSQGT AIEIKEEWRR RVNQREYL