Gene Cagg_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0010 
Symbol 
ID7269006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp9278 
End bp12046 
Gene Length2769 bp 
Protein Length922 aa 
Translation table11 
GC content57% 
IMG OID643564882 
Productvalyl-tRNA synthetase 
Protein accessionYP_002461399 
Protein GI219846966 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0525] Valyl-tRNA synthetase 
TIGRFAM ID[TIGR00422] valyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.885408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00234532 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGATC CGACTGCTGC CCGCCCACTT GAGATGGCCA AAGCCTATGA ACATCGCCTC 
GTCGAGCAGC GGCTTTACGA TTGGTGGGAA CGTAGTGGCC TTTTCGCGCC GCGTGATGAT
GCTCCCCGAC CACCGTTTGT TATTTCGATA CCACCCCCCA ACGTCACCGG TGAATTGCAT
CTCGGCCACG CGATGTTTGT CGCGATTGAG GATCTCATGA TCCGCTGGCG TCGCATGCAA
GGCTATCAGA CGCTATGGGT GCCTGGTACT GACCACGCCG GGATTGCGAC CCAGACGCAG
GTCGAAAAGT TGCTCGAACG TGAAGGTACG TCGCGGCAGG CAGTAGGGCG TGAAGAGTTT
CTACGCCGCA CGTGGGAGTG GAAAGAGAAG TACGGTGGCG AGATTACTCG TCAGTTACGT
CGGTTAGGTG CGTCGTGTGA TTGGTCGCGC GAACGCTTTA CTCTTGACCC CGGCCTCTCG
CGTGCGGTCC ATACCGCTTT TAAGCGCCTG TATGACGACG GCCTGATCTA TCGTGGTATC
TATCTCGTCA ATTGGTCGCC CAAGCTGCAA ACGGCGGTGA GCGACCTTGA GGTCGAATAC
GAAGAGCGTA ATGTCTCGAT CTGGTACGTG TGTTACCCTA TCCGTACCGC TACGTGGACC
GGTCCGACTG CGCCGTGGGG ATCGGGTCAG TGGGCTGCCG GTGCTACCGA GTTTATAACC
GTTGCCACTA CTCGCCCTGA AACGATTCTA GGCGATACCG CTGTGGCCGT CTCACCCGGT
GATGCGCGTT ATGCCCATCT TGTCGGCAAG GAAGCGATCT TGCCGGCTTT GGGTCGTCCT
ATTCCGATCA TCGCCGATGA ATATGTCGAT CCGGAGTTCG GTTCGGGTGC GGTCAAGATT
ACGCCCGGTC ACGACAAGAA TGACTATGAG GTCGGCAAAC GCCATAATTT GCCGATGATT
AACATCATGA ATCCCGATGC GACCATTAAC GAAGCAGGTG GTCCTTACGT CGGGCTTGAT
CGCTTTGCGT GTCGTAAGGC GATTCTGGCC GATCTTGAAC GCGAAGGCTT GCTGGTCAAG
ACCGAACCAC ACAAGATGAA CGTCGGGATT AGTCAGCGTG GTGGTGAGAT CATCGAACCG
CTCCTCTCTG AGCAGTGGTT TGTCCGCACC AAACCGCTCG CCGAGTTGGC CATCGCTGCG
GTACGGGATG GCCGCGTGCG GATCGTTCCT GAACGATTCG AGAAGGTTTA TTTTCACTGG
CTCGAACATA TCGAAGACTG GTGTATTTCG CGCCAGCTCT GGTGGGGCCA TCGGATTCCG
GTCTGGTATC TACCCGATGG CTCTATCGTG GTGCCCGGAT CTGACGAGCC ACCGCCTGCC
GAAGGTGTCC AAGACCCAGA TGTACTCGAT ACATGGTTCA GCTCCGGTCT GTGGCCGTTT
AGTACGCTCG GTTGGCCTGA CGATACCGAC GATTACCGCC GGTTCTATCC GACCAGCGTG
ATGGAGACCG GCTACGATAT CTTGTTCTTC TGGGTGGCGC GGATGATGAT GATGGGTTGC
TACCTTACCG GTCAGCCACC ATTCCATACC GTCTATCTGC ACGGCCTCGT GCGTGACGAA
CACGGACGCA AGATGTCGAA GTCGTTCGGG AACGTCGTCA ATCCGCTTGA GGTCGTCGAG
CAGTACGGCT CTGATGCGCT GCGCTACACC TTGGTAACGA GTGGTACGCC TGGCCAAGAT
GTTAATCTCA ACCCACAACG GATTGAAGCG GCGCGTAATT TTGCCAACAA GATTTGGAAT
ATTACGCGGT TTGTGATCGG TAAATTGGGC GATCTGCCCC GTACCGACAG TGTGAAGATT
ACGCCAGAGA TACTGCACCG CGAGGAGTTT ACCCTTGCCG ATCGCTGGAT TCTCTCGCGC
TATGCCTATC TGGTAGCCGA GGTGGATCGG TTGATGGAAG GGTACAACTT TGGTGAAGCC
GGTCGTCAAA TGCACGATTT CCTGTGGGGT GAGTTTGCCG ACTGGTATGT CGAGATTGCT
AAGGTGCAGC TTGAAGGTGA TGCCCAACGG GCTAACCTCA CCCGGCGCGT GCTCTTTACC
GTGCTTGATG GTAGCTTACG ACTGCTCCAT CCCTTTATGC CCTTCGTGAC CGAGGAGGTG
TGGCAGTATC TCACCGAAGC CTACCAACAG CCCGATCCTA CTCCCACCAC GCCCTACGCC
GAATTGGGTC GGCGTACCCT CAGCTACGCA GCTTATCCAA CACCGCTTGC AGGAATGCAC
GACGAAGCGG TTGAGGCCGA TTGGGCGTTG GTGCAAGAGC TGATTGTGGC CATTCGGAAT
GTGCGCAGTG AGTACAAAGT TGAACCGGCG AAGTGGATTG CGGCTATAGT TGTAGCAGGC
GAACGCGCTG ATCTGTTCCG CACTCAGACC CCGTTGATCA GCCGGTTGGC CCGCGTTGCT
GCCGACAAAC TCACCATCGT CACCGATCTT GCCGAACGTC CACGTCAAGC CGCGTCGATT
GTGATCGGCG CTGTCGAATG TTTCCTACCA CTGGCCGGTC TCATCGATAT TGTCGCAGAA
CGCGACCGTC TCCAAAAAGA ACTGGCCCAA GCCGAAGCAG ACGTTGCCCG TCGTAGCGCT
CGGCTTGCCA ACGAGAGCTT TGTCGGCAAA GCTCCACCAC ACGTTGTCCA AAAAGAGCGT
GAAGCGCTTG CCGCGGCAGA GGCAGCGGTA GCCCGTCTGC GCGAGCGGAT TGCCGAGCTT
GAGGCGTAG
 
Protein sequence
MTDPTAARPL EMAKAYEHRL VEQRLYDWWE RSGLFAPRDD APRPPFVISI PPPNVTGELH 
LGHAMFVAIE DLMIRWRRMQ GYQTLWVPGT DHAGIATQTQ VEKLLEREGT SRQAVGREEF
LRRTWEWKEK YGGEITRQLR RLGASCDWSR ERFTLDPGLS RAVHTAFKRL YDDGLIYRGI
YLVNWSPKLQ TAVSDLEVEY EERNVSIWYV CYPIRTATWT GPTAPWGSGQ WAAGATEFIT
VATTRPETIL GDTAVAVSPG DARYAHLVGK EAILPALGRP IPIIADEYVD PEFGSGAVKI
TPGHDKNDYE VGKRHNLPMI NIMNPDATIN EAGGPYVGLD RFACRKAILA DLEREGLLVK
TEPHKMNVGI SQRGGEIIEP LLSEQWFVRT KPLAELAIAA VRDGRVRIVP ERFEKVYFHW
LEHIEDWCIS RQLWWGHRIP VWYLPDGSIV VPGSDEPPPA EGVQDPDVLD TWFSSGLWPF
STLGWPDDTD DYRRFYPTSV METGYDILFF WVARMMMMGC YLTGQPPFHT VYLHGLVRDE
HGRKMSKSFG NVVNPLEVVE QYGSDALRYT LVTSGTPGQD VNLNPQRIEA ARNFANKIWN
ITRFVIGKLG DLPRTDSVKI TPEILHREEF TLADRWILSR YAYLVAEVDR LMEGYNFGEA
GRQMHDFLWG EFADWYVEIA KVQLEGDAQR ANLTRRVLFT VLDGSLRLLH PFMPFVTEEV
WQYLTEAYQQ PDPTPTTPYA ELGRRTLSYA AYPTPLAGMH DEAVEADWAL VQELIVAIRN
VRSEYKVEPA KWIAAIVVAG ERADLFRTQT PLISRLARVA ADKLTIVTDL AERPRQAASI
VIGAVECFLP LAGLIDIVAE RDRLQKELAQ AEADVARRSA RLANESFVGK APPHVVQKER
EALAAAEAAV ARLRERIAEL EA