| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0004 |
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| Symbol | |
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| ID | 7269000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 4428 |
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| End bp | 5351 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643564876 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002461393 |
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| Protein GI | 219846960 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000105413 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCGTCAG CGATTATCTC ACTTATTGTA ACTGAACCTG AGGCCGGCCT ATCACTTGGC
GCCATTGTCG CCAACCGGTT TGGTGAACGT GGTCGTCAGG CAGCCATCCG TGGTGGGTTG
TGGCAACATG GGCGCCGCGT ATCTGCCGAC ACCCCAGCAC GTGCTGGGGA AACCCTCTTG
GTGCGTTTAC CGCCGGTCGG TGGCTACCGC GATGCTCCTC TCACCTTGAA CCATATCATC
TACGAAGACG ATGATCTGCT CGTGATCAAT AAACCACCTG CCTGTTACAC CGGCGACACA
CCATGGGATA CGCAAGGCAG TGTGTTGGCC GTGGCAAGGC GTCTGCTGAC CGAGCGTGAT
GGTTTGGTAC CTACGTTGCA TCTCGCTCAC CAACTTGATG CTGGTACCTC TGGTATATTG
GTCATCAGTA AACACCCTCG CGCAAACGCA CCTCTGCAAG CCGCTTTCAA CCATGGGCAA
GTAGACAAAC GTTACCTTGC CCTCTGTGCC GGGCATCCAC CGACTGCCAC TGAGCTGATT
ACCGGTCATG GCCGTGCCGC TGCCGGGCGC TGGCGATTGT ACGAGCAGGC TGAGATCGGA
AAGGTGTTAC CCAACGGTCA GCGGGTCAAG CGCGCTCATA CCCAAATCGA GTTACGCCGT
CAGTATGGCG ACGTTGCTCT GGTATGGGCT AAGCCGCTTA CCGGTCGCAC CCACCAAATT
CGTTTGCACC TCGTCGCCCT CGGCTGCCCA TTGCTTGGCG ATGAACGCTA TGGTGGGCCG
ACAACGGTTG CCGGTATGCT AATACCGCAT CCGCTTCTTC ACGCCGCCGA ATTGGCCCTT
CCGCATCCAC GCAGTGGTCG GTTACTTAAC ATCTTTTGTC CGCCACCATC AATCTTTACC
GGTGTACTGA AGTGTTTTGG CTAA
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| Protein sequence | MSSAIISLIV TEPEAGLSLG AIVANRFGER GRQAAIRGGL WQHGRRVSAD TPARAGETLL
VRLPPVGGYR DAPLTLNHII YEDDDLLVIN KPPACYTGDT PWDTQGSVLA VARRLLTERD
GLVPTLHLAH QLDAGTSGIL VISKHPRANA PLQAAFNHGQ VDKRYLALCA GHPPTATELI
TGHGRAAAGR WRLYEQAEIG KVLPNGQRVK RAHTQIELRR QYGDVALVWA KPLTGRTHQI
RLHLVALGCP LLGDERYGGP TTVAGMLIPH PLLHAAELAL PHPRSGRLLN IFCPPPSIFT
GVLKCFG
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