Gene Dhaf_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4955 
Symbol 
ID7261987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp5272561 
End bp5273280 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content46% 
IMG OID643564866 
Productmethyltransferase GidB 
Protein accessionYP_002461383 
Protein GI219670948 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 
TIGRFAM ID[TIGR00138] 16S rRNA methyltransferase GidB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000894491 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACCTG AGCATCAGGA ACTTCTGGGC AGATTAACCC GCCAACGCTT GAATATCGAA 
CTGAGTGGAG ATCAGATTGA AAAGTTTTCT ATATATGCTG ATCGATTGGT TGAATGGAAT
GAAAAGGTCA ATTTAACAAG TATTACGGAA CCCGAAGAAA TAATTCTGAA ACATTTTGTG
GATTCCCTTG CTTTGCTTTC CTTAGTTCAG GGGAAGAGGC TTGCCGATAT TGGCACAGGG
GCTGGGTTTC CCGGAATTCC GCTGAAAATT CTTTTGCCTG AAGTCGAGGT TTATCTGGTG
GACTCTTTGG CTAAACGCTT GGACTTTTTA GAAACAGTTA TTAAAGAATT GAAATTGACC
AAGGTTCAAA CTGTACACGC CAGGGCCGAA GATTTTGCCA GAGACCCTCA TTACCGGGAA
ACCTTTGATT GCGTTACATC CCGGGCAGTC GCCCGCTTGC CTGTATTGCT GGAGTATGCT
GTCCCTCTGC TTAAAAAGGG CGGATATTTT TTAGCGGCCA AAGGATCTCA AGCGCAGGAA
GAGGTTATGG AGTCTAAAAA AGCCTTGACA GTCTTAGGGG CTGAGATCAA AGATATTAAA
CTCTTTAATT TGGGAGCCGA AGCCGAGCAC CGGGCCATTA TCCTGGTGGA GAAAACGTCA
TCAACTCCCC CCGCTTATCC CCGCAAGGCA GGCACTCCCG GAAAGAAGCC TTTAGTGTAG
 
Protein sequence
MLPEHQELLG RLTRQRLNIE LSGDQIEKFS IYADRLVEWN EKVNLTSITE PEEIILKHFV 
DSLALLSLVQ GKRLADIGTG AGFPGIPLKI LLPEVEVYLV DSLAKRLDFL ETVIKELKLT
KVQTVHARAE DFARDPHYRE TFDCVTSRAV ARLPVLLEYA VPLLKKGGYF LAAKGSQAQE
EVMESKKALT VLGAEIKDIK LFNLGAEAEH RAIILVEKTS STPPAYPRKA GTPGKKPLV